File Changes for giardine

v243_base to v244_preview (2010-11-02 to 2010-11-16) v244

• src/hg/hgTracks/simpleTracks.c
  • lines changed 4, context: html, text, full: html, text
    Don't trust freq column to have data or to match the allele count, handle blank, error on mismatch
  • lines changed 1, context: html, text, full: html, text
    Fix for useScore and strand for bed detail (with bed6). Issue 1642 in redmine.
• src/hg/hgc/hgc.c
  • lines changed 1, context: html, text, full: html, text
    Added pgIrish track to pgSnp type hgc clicks
• src/hg/inc/bedDetail.h
  • lines changed 3, context: html, text, full: html, text
    Added error checking for pgSnp and bedDetail custom track loaders, issue #1595
• src/hg/inc/pgSnp.h
  • lines changed 4, context: html, text, full: html, text
    Added error checking for pgSnp and bedDetail custom track loaders, issue #1595
• src/hg/lib/bedDetail.c
  • lines changed 122, context: html, text, full: html, text
    Added error checking for pgSnp and bedDetail custom track loaders, issue #1595
• src/hg/lib/customFactory.c
  • lines changed 15, context: html, text, full: html, text
    Added error checking for pgSnp and bedDetail custom track loaders, issue #1595
  • lines changed 38, context: html, text, full: html, text
    Changed errAborts to lineFileAborts so includes line number in error messages. Improved pgSnp recognizer so type is not required in track line(#1595).
• src/hg/lib/pgSnp.c
  • lines changed 37, context: html, text, full: html, text
    Added error checking for pgSnp and bedDetail custom track loaders, issue #1595
  • lines changed 3, context: html, text, full: html, text
    Changed errAborts to lineFileAborts so includes line number in error messages. Improved pgSnp recognizer so type is not required in track line(#1595).
• src/hg/makeDb/trackDb/human/hg18/pgSnpHgwdev.html
  • lines changed 14, context: html, text, full: html, text
    adding irish snps to genome variants
• src/hg/makeDb/trackDb/human/trackDb.ra
  • lines changed 7, context: html, text, full: html, text
    adding irish snps to genome variants