File Changes for vsmalladi

v245_preview2 to v245_base (2010-12-21 to 2011-01-04) v245

• src/hg/encode/DAFs/2.0/licrMm9Histone.daf
  • lines changed 3, context: html, text, full: html, text
    Removed replicate identification for Peaks and Signals, as data is pooled.
• src/hg/encode/DAFs/2.0/licrMm9Tfbs.daf
  • lines changed 3, context: html, text, full: html, text
    Removed replicate identification for Peaks and Signals, as data is pooled.
• src/hg/encode/DAFs/2.0/uChicagoTfbs.daf
  • lines changed 2, context: html, text, full: html, text
    Updated validation settings.
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwHistone.release1.notes
  • lines changed 18, context: html, text, full: html, text
    Added 16 previously missing fastq's to release notes and director.
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwTfbs.release1.notes
  • lines changed 26, context: html, text, full: html, text
    Added 24 previously missing fastq's to release notes and director.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeUwDnaseSeq.new.ra
  • lines changed 178, context: html, text, full: html, text
    Fixed commit a274c43385c1eccb4868875039705057d7381e13 by addign back deleted rows in the trackDb.
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra
  • lines changed 2477, context: html, text, full: html, text
    Added 12 submissions to track and meta-data.
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDgf.ra
  • lines changed 33, context: html, text, full: html, text
    Added fastq files missing for K562 and GM06990 cell lines
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra
  • lines changed 353, context: html, text, full: html, text
    Added meta-data for missing fastq's.
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwTfbs.ra
  • lines changed 529, context: html, text, full: html, text
    Added meta-data for 24 missing fastq's.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.ra
  • lines changed 257, context: html, text, full: html, text
    Added 12 submissions to track and meta-data.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.ra
  • lines changed 1, context: html, text, full: html, text
    Removed reference of short labels of views to 2 letters since short label varry from 2-4 letters.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.ra
  • lines changed 1, context: html, text, full: html, text
    Removed reference of short labels of views to 2 letters since short label varry from 2-4 letters.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.ra
  • lines changed 451, context: html, text, full: html, text
    Updated shortLabels, cell, factor and view abbreviations, so that the shortLabels are less than or equal to 17 characters.
  • lines changed 1, context: html, text, full: html, text
    Removed referece to Rank in notes section.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwTfbs.ra
  • lines changed 189, context: html, text, full: html, text
    Updated shortLabels: cell, factor and view abbreviations, so that the shortLabels are less than or equal to 17 characters.
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhHistone.ra
  • lines changed 24, context: html, text, full: html, text
    Upgraded the notes for this track to provide better explanation of display settings.
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.newR2.ra
  • lines changed 19, context: html, text, full: html, text
    Upgraded the notes for the tracks to provide better explanation of display settings.
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.ra
  • lines changed 18, context: html, text, full: html, text
    Upgraded the notes for the tracks to provide better explanation of display settings.
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwDnase.ra
  • lines changed 21, context: html, text, full: html, text
    Updated track long and short labels to ENCODE track labeling guide.