File Changes for tdreszer

v244_base to v245_preview (2010-12-07 to 2010-12-14) v245

• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 47, context: html, text, full: html, text
    Added support for 'downloadsOnly' style tracks which will call fileDb APIs to present downloadable files from cgi.
• src/hg/hgTracks/hgTracks.c
  • lines changed 2, context: html, text, full: html, text
    Not ready for prime time 'downloadsOnly track type.
  • lines changed 3, context: html, text, full: html, text
    Part of redmine #1333.4 fix. Subtracks were *sometimes* not getting vis from parent on rightClick.
  • lines changed 6, context: html, text, full: html, text
    Fix for after midnight release hold bug. This reintroduces lesser problem of finding and selecting both composite and child subtrack at the same time, but solves the major problem of not being able to set composite level visibility
• src/hg/hgTracks/variation.c
  • lines changed 25, context: html, text, full: html, text
    Fixed type=ld2 form remine #1333.4. Didn't work with ClosestToHome logic which caused rightClick weirdnesses.
• src/hg/htdocs/style/HGStyle.css
  • lines changed 8, context: html, text, full: html, text
    Added styles to support table.sortable.
• src/hg/inc/fileUi.h
  • lines changed 34, context: html, text, full: html, text
    Needed for fileDb APIs which present downloadable files from cgi as table.sortable
• src/hg/inc/hdb.h
  • lines changed 4, context: html, text, full: html, text
    Added tdbForTrack to replace hTrackDbForTrack. New version allows passing in the list of tdbs, so that the list is not regenerated time and time again.
• src/hg/inc/hui.h
  • lines changed 7, context: html, text, full: html, text
    Split compositeUiSubtracks into hgTrackUi vs hgTable versions. Remade subtrack list using the new 'sortable' table methods. Remade makeTrackHashWithComposites to take in/out for tdbList, enabling few rebuilds of this list.
  • lines changed 1, context: html, text, full: html, text
    Fix makeTrackHash macro for only 2 args
• src/hg/inc/mdb.h
  • lines changed 7, context: html, text, full: html, text
    Added 2 useful APIs
• src/hg/js/hgTracks.js
  • lines changed 5, context: html, text, full: html, text
    Fixed obscure bug where map area had no COORDS. FF on Linux prevented rightClick occasionally because of this.
• src/hg/js/hui.js
  • lines changed 397, context: html, text, full: html, text
    Moved sort routines from hui.js to utils.js and rewrote them so they are not hgTrackUi subtrack list specific. Use table.sortable to make almost any table sortable
• src/hg/js/utils.js
  • lines changed 604, context: html, text, full: html, text
    Moved sort routines from hui.js to utils.js and rewrote them so they are not hgTrackUi subtrack list specific. Use table.sortable to make almost any table sortable
• src/hg/lib/cart.c
  • lines changed 3, context: html, text, full: html, text
    ClosestToHome will now support suffixes that begin with '_'.
  • lines changed 8, context: html, text, full: html, text
    Emergency fix to composite reshaping code. Checked it with code commented out to illustrate the exact change.
  • lines changed 10, context: html, text, full: html, text
    Did I say last time was the fix? No no, this time really.
  • lines changed 9, context: html, text, full: html, text
    Reverting back 2 previous checkins in order to give single clean checkin as push request.
  • lines changed 9, context: html, text, full: html, text
    This is the sime clean fix for Showstopper bug 1071 on 12-13-2010
  • lines changed 9, context: html, text, full: html, text
    Back out all last minute changes to cart as ill adviced at this time
• src/hg/lib/fileUi.c
  • lines changed 491, context: html, text, full: html, text
    Added fileUi.c which supports making downloadable files cgi with table.sortable and eventually filterBoxes
• src/hg/lib/hdb.c
  • lines changed 19, context: html, text, full: html, text
    Added tdbForTrack to replace hTrackDbForTrack. New version allows passing in the list of tdbs, so that the list is not regenerated time and time again.
• src/hg/lib/hui.c
  • lines changed 252, context: html, text, full: html, text
    Split compositeUiSubtracks into hgTrackUi vs hgTable versions. Remade subtrack list using the new 'sortable' table methods. Remade makeTrackHashWithComposites to take in/out for tdbList, enabling few rebuilds of this list.
• src/hg/lib/makefile
  • lines changed 1, context: html, text, full: html, text
    Added fileUi.c which supports making downloadable files cgi with table.sortable and eventually filterBoxes
• src/hg/lib/mdb.c
  • lines changed 65, context: html, text, full: html, text
    Added 2 useful APIs
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra
  • lines changed 215, context: html, text, full: html, text
    Two missing controls were submitted
  • lines changed 50, context: html, text, full: html, text
    Noticed 49 fileIndexes missing from the mdb
  • lines changed 2, context: html, text, full: html, text
    Fix typo
• src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.html
  • lines changed 89, context: html, text, full: html, text
    Broad finally provided their methods update.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.ra
  • lines changed 248, context: html, text, full: html, text
    Broad submitted 2 missing controls.