Commits for aamp

v246_preview2 to v246_base (2011-01-18 to 2011-01-25) v246

• Added stuff for making the bedGraph file ok.
  • src/hg/makeDb/doc/hg19.txt - lines changed 10, context: html, text, full: html, text
• Fixing the problem with the Fosmid Pairs track with clicks on an alignment.
  • src/hg/makeDb/doc/hg19.txt - lines changed 6, context: html, text, full: html, text
• Changed table-copying technique because indexes in the hg18 tables were not preserved in the copy. This way they are.
  • src/hg/makeDb/doc/hg19.txt - lines changed 8, context: html, text, full: html, text
• Changed table-copy method from hg18 so indexes are preserved.
  • src/hg/makeDb/doc/hg19.txt - lines changed 1, context: html, text, full: html, text
• Removed a link in the hg19 version of the description that auto-loaded an hg18 custom track on hg19 which caused an error.
  • src/hg/makeDb/trackDb/human/hg19/gad.html - lines changed 95, context: html, text, full: html, text
• genePredToPsl.c
  • src/hg/altSplice/altSplice/genePredToPsl.c - lines changed 2, context: html, text, full: html, text
• Stuff for Hapmap tracks lift to hg19 (SNPs and LD Phased)
  • src/hg/makeDb/doc/hg19.txt - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hapmapLdPh.html - lines changed 175, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/hapmapLdPh.html - lines changed 175, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/trackDb.ra - lines changed 30, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 30, context: html, text, full: html, text