7afcaa5ee1842d46dccaaeaaa584063c05e01ffa donnak Wed Jan 19 09:55:03 2011 -0800 Removed coverage info from danRer7 announcement -- I think this was a carryover from the previous release, and I don't see info from Sanger backing up this number. diff --git src/hg/htdocs/indexNews.html src/hg/htdocs/indexNews.html index 5805b2c..8e23c43 100644 --- src/hg/htdocs/indexNews.html +++ src/hg/htdocs/indexNews.html @@ -25,32 +25,32 @@ TARGET=_blank>genome-announce</A> mailing list.</P> <!-- start news --> <P> <FONT FACE="courier" SIZE="3"><B>19 January 2011 - Browser Released for Zebrafish Zv9 Assembly</B></FONT> <P> The most recent zebrafish assembly -- Zv9 (UCSC version danRer7, Jul. 2010) -- is now available in the UCSC Genome Browser. This assembly was produced by <A HREF="http://www.sanger.ac.uk/" TARGET=_blank>The Wellcome Trust Sanger Institute</A>, UK. </P> <P> The Zv9 assembly comprises a sequence length of 1.4 Gb in - 26 chromosomes and 1,107 scaffolds with a coverage of - 6.5-7x. This assembly is based on a clone path sorted with + 26 chromosomes and 1,107 scaffolds. This assembly is based + on a clone path sorted with the high-density meiotic map SATMAP (Clark et al., in preparation). The data freeze was taken on 1 April 2010. The remaining gaps were filled with sequence from WGS31, a combined Illumina and capillary assembly. The assembly integration process involved sequence alignemnts as well as cDNA, marker and BAC/Fosmid end sequence placements. The zebrafish mitochondrial sequence is also available in the Genome Browser as the virtual chromosome chrM. For more details about the Zv9 assembly, see the Sanger Institute page for the <A HREF="http://www.sanger.ac.uk/Projects/D_rerio/Zv9_assembly_information.shtml" TARGET=_blank><em>Danio rerio</em> Sequencing Project</A>. </P> <P>