416e9300eb4281e887e5671c379509194bf1a7f2
kent
  Tue Jan 18 23:29:43 2011 -0800
Fixed bug with bigBed in table browser.
diff --git src/hg/hgTables/bigBed.c src/hg/hgTables/bigBed.c
index 11b1d75..bc0ec09 100644
--- src/hg/hgTables/bigBed.c
+++ src/hg/hgTables/bigBed.c
@@ -60,67 +60,61 @@
 struct asObject *bigBedAsForTable(char *table, struct sqlConnection *conn)
 /* Get asObject associated with bigBed table. */
 {
 char *fileName = bigBedFileName(table, conn);
 struct bbiFile *bbi = bigBedFileOpen(fileName);
 struct asObject *as = bigBedAsOrDefault(bbi);
 bbiFileClose(&bbi);
 freeMem(fileName);
 return as;
 }
 
 struct hTableInfo *bigBedToHti(char *table, struct sqlConnection *conn)
 /* Get fields of bigBed into hti structure. */
 {
 /* Get columns in asObject format. */
-uglyf("ok 5.1.1.1<BR>\n");
 char *fileName = bigBedFileName(table, conn);
-uglyf("ok 5.1.1.2 fileName=%s<BR>\n", fileName);
 struct bbiFile *bbi = bigBedFileOpen(fileName);
-uglyf("ok 5.1.1.3<BR>\n");
 struct asObject *as = bigBedAsOrDefault(bbi);
-uglyf("ok 5.1.1.4<BR>\n");
 
 /* Allocate hTableInfo structure and fill in info about bed fields. */
 struct hash *colHash = asColumnHash(as);
 struct hTableInfo *hti;
 AllocVar(hti);
 hti->rootName = cloneString(table);
 hti->isPos= TRUE;
 fillField(colHash, "chrom", hti->chromField);
 fillField(colHash, "chromStart", hti->startField);
 fillField(colHash, "chromEnd", hti->endField);
 fillField(colHash, "name", hti->nameField);
 fillField(colHash, "score", hti->scoreField);
 fillField(colHash, "strand", hti->strandField);
 fillField(colHash, "thickStart", hti->cdsStartField);
 fillField(colHash, "thickEnd", hti->cdsEndField);
 fillField(colHash, "blockCount", hti->countField);
 fillField(colHash, "chromStarts", hti->startsField);
 fillField(colHash, "blockSizes", hti->endsSizesField);
 hti->hasCDS = (bbi->definedFieldCount >= 8);
 hti->hasBlocks = (bbi->definedFieldCount >= 12);
 char type[256];
 safef(type, sizeof(type), "bed %d %c", bbi->definedFieldCount,
 	(bbi->definedFieldCount == bbi->fieldCount ? '.' : '+'));
 hti->type = cloneString(type);
-uglyf("ok 5.1.1.5<BR>\n");
 
 freeMem(fileName);
 hashFree(&colHash);
 bbiFileClose(&bbi);
-uglyf("ok 5.1.1.6<BR>\n");
 return hti;
 }
 
 struct slName *asColNames(struct asObject *as)
 /* Get list of column names. */
 {
 struct slName *list = NULL, *el;
 struct asColumn *col;
 for (col = as->columnList; col != NULL; col = col->next)
     {
     el = slNameNew(col->name);
     slAddHead(&list, el);
     }
 slReverse(&list);
 return list;