Commits for tdreszer

v245_base to v246_preview (2011-01-04 to 2010-01-11) v246

• Fixed bug an multiple mdb term query where early round has no results, so later hits are mistakenly seen as valid.
  • src/hg/hgTracks/searchTracks.c - lines changed 2, context: html, text, full: html, text
• Added link to supplemental materials.
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.html - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.html - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html - lines changed 8, context: html, text, full: html, text
• Reordered UTA TFBS cell lines and added fileSortOrder to use new hgFileUi cgi.
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.ra - lines changed 2, context: html, text, full: html, text
• Support for supplemental materials directory in hgFileUi cgi.
  • src/hg/lib/fileUi.c - lines changed 7, context: html, text, full: html, text
• Refinement of supplemental link. If supplemental is soft link as with Open Chrom, it was failing to appear.
  • src/hg/lib/fileUi.c - lines changed 4, context: html, text, full: html, text
• Hide mdb var 'dccInternalNotes' from '...', index.html and files.txt
  • src/hg/encode/encodeDownloadsPage/encodeDownloadsPage.pl - lines changed 3, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 1, context: html, text, full: html, text
• Fixed redmine 1333.15. Subtrack specific vis should be eliminated when rightClicking to hide.
  • src/hg/js/hgTracks.js - lines changed 4, context: html, text, full: html, text
• files.txt file should only be made when making 'index.html'. Don't bother when making a test html.
  • src/hg/encode/encodeDownloadsPage/encodeDownloadsPage.pl - lines changed 2, context: html, text, full: html, text
• Fixed a bunch of stuff in Open Chromatin docs and limited those 3 and Broad to max 900 pixels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.html - lines changed 115, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.html - lines changed 98, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html - lines changed 105, context: html, text, full: html, text
• Not important but these should link to their own subdirs. Not important because the contents should be identical and are soft-linked in genome-test.
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html - lines changed 1, context: html, text, full: html, text
• Getting more clever in with CSS
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.html - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.html - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html - lines changed 8, context: html, text, full: html, text
• Updated some fastqs and standardized labs.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 20, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra - lines changed 379, context: html, text, full: html, text
• Straighened out some V@s that should not have been
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 104, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 70, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra - lines changed 193, context: html, text, full: html, text