ea8b7de586447b28fdcf004a045d94891f213250
braney
  Tue Jan 11 11:58:02 2011 -0800
gencode metadata autoSql
diff --git src/hg/inc/wgEncodeGencodeSource.h src/hg/inc/wgEncodeGencodeSource.h
new file mode 100644
index 0000000..1e29dfb
--- /dev/null
+++ src/hg/inc/wgEncodeGencodeSource.h
@@ -0,0 +1,68 @@
+/* wgEncodeGencodeSource.h was originally generated by the autoSql program, which also 
+ * generated wgEncodeGencodeSource.c and wgEncodeGencodeSource.sql.  This header links the database and
+ * the RAM representation of objects. */
+
+#ifndef WGENCODEGENCODESOURCE_H
+#define WGENCODEGENCODESOURCE_H
+
+#define WGENCODEGENCODESOURCE_NUM_COLS 2
+
+enum wgEncodeGencodeSourceSource
+    {
+    wgEncodeGencodeSourceEnsembl = 0,
+    wgEncodeGencodeSourceShares_CDS = 1,
+    wgEncodeGencodeSourceShares_CDS_and_UTR = 2,
+    };
+struct wgEncodeGencodeSource
+/* Gencode metadata table of the source of Gencode Gene transcripts */
+    {
+    struct wgEncodeGencodeSource *next;  /* Next in singly linked list. */
+    char *transcriptId;	/* Transcript ID for Gencode gene */
+    enum wgEncodeGencodeSourceSource source;	/* Source of transcript */
+    };
+
+void wgEncodeGencodeSourceStaticLoad(char **row, struct wgEncodeGencodeSource *ret);
+/* Load a row from wgEncodeGencodeSource table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+
+struct wgEncodeGencodeSource *wgEncodeGencodeSourceLoad(char **row);
+/* Load a wgEncodeGencodeSource from row fetched with select * from wgEncodeGencodeSource
+ * from database.  Dispose of this with wgEncodeGencodeSourceFree(). */
+
+struct wgEncodeGencodeSource *wgEncodeGencodeSourceLoadAll(char *fileName);
+/* Load all wgEncodeGencodeSource from whitespace-separated file.
+ * Dispose of this with wgEncodeGencodeSourceFreeList(). */
+
+struct wgEncodeGencodeSource *wgEncodeGencodeSourceLoadAllByChar(char *fileName, char chopper);
+/* Load all wgEncodeGencodeSource from chopper separated file.
+ * Dispose of this with wgEncodeGencodeSourceFreeList(). */
+
+#define wgEncodeGencodeSourceLoadAllByTab(a) wgEncodeGencodeSourceLoadAllByChar(a, '\t');
+/* Load all wgEncodeGencodeSource from tab separated file.
+ * Dispose of this with wgEncodeGencodeSourceFreeList(). */
+
+struct wgEncodeGencodeSource *wgEncodeGencodeSourceCommaIn(char **pS, struct wgEncodeGencodeSource *ret);
+/* Create a wgEncodeGencodeSource out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new wgEncodeGencodeSource */
+
+void wgEncodeGencodeSourceFree(struct wgEncodeGencodeSource **pEl);
+/* Free a single dynamically allocated wgEncodeGencodeSource such as created
+ * with wgEncodeGencodeSourceLoad(). */
+
+void wgEncodeGencodeSourceFreeList(struct wgEncodeGencodeSource **pList);
+/* Free a list of dynamically allocated wgEncodeGencodeSource's */
+
+void wgEncodeGencodeSourceOutput(struct wgEncodeGencodeSource *el, FILE *f, char sep, char lastSep);
+/* Print out wgEncodeGencodeSource.  Separate fields with sep. Follow last field with lastSep. */
+
+#define wgEncodeGencodeSourceTabOut(el,f) wgEncodeGencodeSourceOutput(el,f,'\t','\n');
+/* Print out wgEncodeGencodeSource as a line in a tab-separated file. */
+
+#define wgEncodeGencodeSourceCommaOut(el,f) wgEncodeGencodeSourceOutput(el,f,',',',');
+/* Print out wgEncodeGencodeSource as a comma separated list including final comma. */
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+
+#endif /* WGENCODEGENCODESOURCE_H */
+