ec5633a2cff4b43137e7940ead29493eed8828de kent Thu Jan 13 20:48:05 2011 -0800 Fixing hgTracks so that hub is in it's own group again. Broke this with some efforts to get things going in hgTables. diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c index 00edbd0..15bc22c 100644 --- src/hg/hgc/hgc.c +++ src/hg/hgc/hgc.c @@ -6781,31 +6781,30 @@ errAbort("Couldn't find alignment at %s:%d", seqName, start); oSeqList = faReadAllSeq(faName, !isProt); for (oSeq = oSeqList; oSeq != NULL; oSeq = oSeq->next) { if (sameString(oSeq->name, qName)) break; } if (oSeq == NULL) errAbort("%s is in %s but not in %s. Internal error.", qName, pslName, faName); wholePsl = psl; rnaSeq = oSeq; } else { /* Look up alignments in database */ - // struct trackDb *tdb = hashMustFindVal(trackHash, aliTable); // ugly hFindSplitTable(database, seqName, aliTable, table, &hasBin); safef(query, sizeof(query), "select * from %s where qName = '%s' and tName=\"%s\" and tStart=%d", table, acc, seqName, start); sr = sqlGetResult(conn, query); if ((row = sqlNextRow(sr)) == NULL) errAbort("Couldn't find alignment for %s at %d", acc, start); wholePsl = pslLoad(row+hasBin); sqlFreeResult(&sr); if (startsWith("ucscRetroAli", aliTable) || startsWith("retroMrnaAli", aliTable) || sameString("pseudoMrna", aliTable) || sameString("altSeqLiftOverPsl", aliTable)) { rnaSeq = NULL; char *trackName = hGetTrackForTable(database, aliTable); struct trackDb *tdb = hashMustFindVal(trackHash, trackName);