78dfd4b6e906a962da40780c799f92bb7ea1b3c1 kent Wed Jan 12 15:47:29 2011 -0800 Starting to integrate data hub into table browser. Still problems, so effectively is commented out at the moment. diff --git src/hg/inc/hubConnect.h src/hg/inc/hubConnect.h index c74d6b7..169c606 100644 --- src/hg/inc/hubConnect.h +++ src/hg/inc/hubConnect.h @@ -1,73 +1,73 @@ /* hubConnect - stuff to manage connections to track hubs. Most of this is mediated through * the hubConnect table in the hgCentral database. Here there are routines to translate between * hub symbolic names and hub URLs, to see if a hub is up or down or sideways (up but badly * formatted) etc. Note that there is no C structure corresponding to a row in the hubConnect * table by design. We just want field-by-field access to this. */ #ifndef HUBCONNECT_H #define HUBCONNECT_H #define hubConnectTableName "hubConnect" /* Name of our table. */ #define hubTrackPrefix "hub_" /* The names of all hub tracks begin with this. Use in cart. */ boolean isHubTrack(char *trackName); /* Return TRUE if it's a hub track. */ struct hubConnectStatus /* Basic status on hubConnect. Note it is *not* the same as the * hubConnect table, that has a bunch of extra fields to help * keep track of whether the hub is alive. */ { struct hubConnectStatus *next; int id; /* Hub ID */ char *shortLabel; /* Hub short label. */ char *longLabel; /* Hub long label. */ char *hubUrl; /* URL to hub.ra file. */ char *errorMessage; /* If non-empty hub has an error and this describes it. */ unsigned dbCount; /* Number of databases hub has data for. */ char **dbArray; /* Array of databases hub has data for. */ }; void hubConnectStatusFree(struct hubConnectStatus **pHub); /* Free hubConnectStatus */ void hubConnectStatusFreeList(struct hubConnectStatus **pList); /* Free a list of dynamically allocated hubConnectStatus's */ struct hubConnectStatus *hubConnectStatusForId(struct sqlConnection *conn, int id); /* Given a hub ID return associated status. */ -struct hubConnectStatus *hubConnectStatusFromCart(struct cart *cart); +struct hubConnectStatus *hubConnectStatusListFromCart(struct cart *cart); /* Return list of track hubs that are turned on by user in cart. */ #define hubConnectTrackHubsVarName "trackHubs" /* Name of cart variable with list of track hubs. */ #define hgHubConnectCgiDestUrl "hgHubConnect.destUrl" /* Cart variable to tell hgHubConnect where to go on submit. */ #define hgHubConnectRemakeTrackHub "hgHubConnect.remakeTrackHub" /* Cart variable to indicate trackHub cart variable needs refreshing. */ #define hgHubConnectHubVarPrefix "hgHubConnect.hub." /* Prefix to temporary variable holding selected cart names. */ boolean hubConnectTableExists(); /* Return TRUE if the hubConnect table exists. */ struct slName *hubConnectHubsInCart(struct cart *cart); /* Return list of track hub ids that are turned on by user. */ int hubIdFromTrackName(char *trackName); /* Given something like "hub_123_myWig" return 123 */ struct trackDb *hubConnectAddHubForTrackAndFindTdb(char *database, char *trackName, struct trackDb **pTdbList, struct hash *trackHash); /* Go find hub for trackName (which will begin with hub_), and load the tracks * for it, appending to end of list and adding to trackHash. Return the * trackDb associated with trackName. */ #endif /* HUBCONNECT_H */