File Changes for cricket

v247_preview2 to v247_base (2011-02-08 to 2011-02-14) v247

• src/hg/encode/DAFs/2.0/cshlLongElements.daf
  • lines changed 19, context: html, text, full: html, text
    Added the headers for all Transcriptome DAFs, added Elements views
• src/hg/encode/DAFs/2.0/cshlLongRnaSeq.daf
  • lines changed 13, context: html, text, full: html, text
    Added the headers for all Transcriptome DAFs, added Elements views
• src/hg/encode/DAFs/2.0/cshlShortRnaSeq.daf
  • lines changed 37, context: html, text, full: html, text
    Added the headers for all Transcriptome DAFs, added Elements views
• src/hg/encode/DAFs/2.0/gisRnaElements.daf
  • lines changed 42, context: html, text, full: html, text
    Added the headers for all Transcriptome DAFs, added Elements views
• src/hg/encode/DAFs/2.0/gisRnaPet.daf
  • lines changed 26, context: html, text, full: html, text
    Added the headers for all Transcriptome DAFs, added Elements views
• src/hg/encode/DAFs/2.0/rikenCageSolexa.daf
  • lines changed 33, context: html, text, full: html, text
    Added the headers for all Transcriptome DAFs, added Elements views
• src/hg/encode/DAFs/2.0/rikenElements.daf
  • lines changed 39, context: html, text, full: html, text
    Added the headers for all Transcriptome DAFs, added Elements views
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeRikenCage.release1.notes
  • lines changed 29, context: html, text, full: html, text
    Dropped tables like wgEncodeRikenCageK562NucleolusTotal
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeDukeAffyExon.ra
  • lines changed 4, context: html, text, full: html, text
    added dateSubmitted where missing
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibMethylRrbs.ra
  • lines changed 20, context: html, text, full: html, text
    removed crufty object
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra
  • lines changed 18, context: html, text, full: html, text
    removed entry that had no file attached to it
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra
  • lines changed 99, context: html, text, full: html, text
    Added the better downloads page, changed the .html to say Signals instead of Clusters, removed 2 questionable tracks
  • lines changed 76, context: html, text, full: html, text
    Added replicate 0 as a place holder
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeYaleRnaSeq.ra
  • lines changed 160, context: html, text, full: html, text
    added the signals back in and changed labels
  • lines changed 43, context: html, text, full: html, text
    Fixed the fastqs to have the correct metadata
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethyl27.ra
  • lines changed 12, context: html, text, full: html, text
    Added maxWindowsToDraw and viewUi, sorting the cell-lines by Tier
• src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.html
  • lines changed 1, context: html, text, full: html, text
    Added the better downloads page, changed the .html to say Signals instead of Clusters, removed 2 questionable tracks
  • lines changed 6, context: html, text, full: html, text
    Added release notes and comment about custom tag
  • lines changed 1, context: html, text, full: html, text
    fixed broken link
• src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.new.ra
  • lines changed 1, context: html, text, full: html, text
    Added the better downloads page, changed the .html to say Signals instead of Clusters, removed 2 questionable tracks
• src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.ra
  • lines changed 46, context: html, text, full: html, text
    Added the better downloads page, changed the .html to say Signals instead of Clusters, removed 2 questionable tracks
  • lines changed 1, context: html, text, full: html, text
    Changed settings for maxWindowsToDraw for Vanessa
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyTiling.ra
  • lines changed 1, context: html, text, full: html, text
    Changed title to match the new standard
  • lines changed 1, context: html, text, full: html, text
    removed the Tenebaum name from the label
• src/hg/makeDb/trackDb/human/hg19/wgEncodeYaleRnaSeq.html
  • lines changed 0, context: html, text, full: html, text
    added the signals back in and changed labels
• src/hg/makeDb/trackDb/human/hg19/wgEncodeYaleRnaSeq.ra
  • lines changed 114, context: html, text, full: html, text
    Changed labels and added new polyA- AMA50 experiment
  • lines changed 80, context: html, text, full: html, text
    added the signals back in and changed labels
• src/hg/utils/automation/Encode.pm
  • lines changed 2, context: html, text, full: html, text
    Changing the Freeze date