8dedff1fa1cebac92b4a66ae13a3f94a2ed3e709 hiram Fri Feb 11 14:41:51 2011 -0800 adding printVmPeak() debug call to each of the big* commands diff --git src/utils/bigBedSummary/bigBedSummary.c src/utils/bigBedSummary/bigBedSummary.c index b1eba94..d738393 100644 --- src/utils/bigBedSummary/bigBedSummary.c +++ src/utils/bigBedSummary/bigBedSummary.c @@ -1,24 +1,25 @@ /* bigBedSummary - Extract summary information from a bigBed file.. */ #include "common.h" #include "linefile.h" #include "hash.h" #include "options.h" #include "sqlNum.h" #include "bigBed.h" #include "asParse.h" #include "udc.h" +#include "obscure.h" static char const rcsid[] = "$Id: bigBedSummary.c,v 1.7 2009/09/08 19:50:24 kent Exp $"; char *summaryType = "coverage"; void usage() /* Explain usage and exit. */ { errAbort( "bigBedSummary - Extract summary information from a bigBed file.\n" "usage:\n" " bigBedSummary file.bb chrom start end dataPoints\n" "Get summary data from bigBed for indicated region, broken into\n" "dataPoints equal parts. (Use dataPoints=1 for simple summary.)\n" "options:\n" @@ -101,17 +102,19 @@ optionInit(&argc, argv, options); udcSetDefaultDir(optionVal("udcDir", udcDefaultDir())); if (optionExists("fields")) { if (argc < 2) usage(); bigBedFields(argv[1]); } else { summaryType = optionVal("type", summaryType); if (argc != 6) usage(); bigBedSummary(argv[1], argv[2], sqlUnsigned(argv[3]), sqlUnsigned(argv[4]), sqlUnsigned(argv[5])); } +if (verboseLevel() > 1) + printVmPeak(); return 0; }