8dedff1fa1cebac92b4a66ae13a3f94a2ed3e709 hiram Fri Feb 11 14:41:51 2011 -0800 adding printVmPeak() debug call to each of the big* commands diff --git src/utils/bigBedToBed/bigBedToBed.c src/utils/bigBedToBed/bigBedToBed.c index 6509b25..ba7b751 100644 --- src/utils/bigBedToBed/bigBedToBed.c +++ src/utils/bigBedToBed/bigBedToBed.c @@ -1,23 +1,24 @@ /* bigBedToBed - Convert from bigBed to ascii bed format.. */ #include "common.h" #include "linefile.h" #include "hash.h" #include "options.h" #include "localmem.h" #include "udc.h" #include "bigBed.h" +#include "obscure.h" static char const rcsid[] = "$Id: bigBedToBed.c,v 1.7 2009/09/08 19:50:24 kent Exp $"; char *clChrom = NULL; int clStart = -1; int clEnd = -1; int maxItems = 0; void usage() /* Explain usage and exit. */ { errAbort( "bigBedToBed - Convert from bigBed to ascii bed format.\n" "usage:\n" " bigBedToBed input.bb output.bed\n" @@ -82,17 +83,19 @@ bbiFileClose(&bbi); } int main(int argc, char *argv[]) /* Process command line. */ { optionInit(&argc, argv, options); clChrom = optionVal("chrom", clChrom); clStart = optionInt("start", clStart); clEnd = optionInt("end", clEnd); maxItems = optionInt("maxItems", maxItems); udcSetDefaultDir(optionVal("udcDir", udcDefaultDir())); if (argc != 3) usage(); bigBedToBed(argv[1], argv[2]); +if (verboseLevel() > 1) + printVmPeak(); return 0; }