6031d05b102c1cb34c9e8394a8acf5809a8eca8f angie Mon Jan 31 16:19:37 2011 -0800 Track #34 (dbVar for human): Added new track type gvf with basichandlers in hgTracks and hgc. dbVar's GVF attributes are recognized, esp. var_type is used to color items, and items are sorted using the Parent keyword so that parents appear immediately before their children, and children are sorted by var_type. Attributes are displayed in hgc; need to do a bit better for the Start_range and End_range (e.g. translate "." to "inner start unknown" etc.). diff --git src/hg/hgTracks/makefile src/hg/hgTracks/makefile index 053a297..6377e91 100644 --- src/hg/hgTracks/makefile +++ src/hg/hgTracks/makefile @@ -1,27 +1,27 @@ include ../../inc/common.mk L += ${MYSQLLIBS} -lm MYLIBDIR = ../../lib/${MACHTYPE} MYLIBS = ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a A = hgTracks COMMONO = altGraphXTrack.o bamTrack.o bedGraph.o bedTrack.o bigBedTrack.o bigWigTrack.o \ chainTrack.o cgapSageTrack.o chromGraphTrack.o config.o container.o contigTrack.o \ coverageTrack.o cytoBandTrack.o cutterTrack.o \ - expRatioTracks.o factorSource.o hgTracks.o goldTrack.o loweLabTracks.o \ + expRatioTracks.o factorSource.o hgTracks.o goldTrack.o gvfTrack.o loweLabTracks.o \ mafTrack.o makeItemsTrack.o multiWig.o netTrack.o pslTrack.o rmskTrack.o \ sampleTracks.o searchTracks.o simpleTracks.o switchGear.o transMapTracks.o \ wabaTrack.o wigTrack.o cds.o \ wigMafTrack.o encode.o variation.o transcriptome.o\ rnaFoldTrack.o retroGene.o hapmapTrack.o rnaPLFoldTrack.o\ wiki.o wikiTrack.o imageV2.o O = mainMain.o ${COMMONO} include ../../inc/cgi_build_rules.mk ifeq (${GBROWSE}, 1) GBROWSE_D=-DGBROWSE A = gbrowseTest O = $A.o oneTrack.o \