Commits for braney

v246_base to v247_preview (2011-01-25 to 2011-02-01) v247

• put out BAM tags with htmTextOut so '<' and such are not interpreted as HTML codes #2543
  • src/hg/lib/bamFile.c - lines changed 2, context: html, text, full: html, text
• Merge branch 'master' of braney@hgwdev.cse.ucsc.edu:/data/git/kent
• some label changes
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGisChiaPet.ra - lines changed 11, context: html, text, full: html, text
• Merge branch 'master' of braney@hgwdev.cse.ucsc.edu:/data/git/kent
• include merge commits #2517. We'll probably filter some subset of them out if they're filled with pointless automaticity.
  • src/utils/git-reports/git-reports.c - lines changed 2, context: html, text, full: html, text
• Merge branch 'master' of braney@hgwdev.cse.ucsc.edu:/data/git/kent
• make bedLogR be supported like a normal bed file
  • src/hg/hgTracks/simpleTracks.c - lines changed 1, context: html, text, full: html, text
• Merge branch 'master' of braney@hgwdev.cse.ucsc.edu:/data/git/kent
• use bedLogR handler for this
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibGenotype.ra - lines changed 86, context: html, text, full: html, text
• Merge branch 'master' of braney@hgwdev.cse.ucsc.edu:/data/git/kent
• wgEncodeAffyRnaChip was included twice
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/makefile - lines changed 3, context: html, text, full: html, text
• v247 preview
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text
• Merge branch 'master' of hgwdev:/data/git/kent