Commits for hiram

v247_base to v248_preview (2011-02-14 to 2011-02-22) v248

• clarify bigBed and bigWig loading instructions
  • src/hg/makeDb/trackDb/README - lines changed 11, context: html, text, full: html, text
• allow up to 16 Gb of allocation for needLargeMem() on 64 bit machines
  • src/lib/memalloc.c - lines changed 2, context: html, text, full: html, text
• adding VmPeak printout to check memory usage
  • src/hg/makeDb/hgLoadWiggle/hgLoadWiggle.c - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/hgLoadWiggle/hgWiggle.c - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/hgLoadWiggle/wigEncode.c - lines changed 3, context: html, text, full: html, text
• make non split gold gap the default
  • src/hg/utils/automation/makeGenomeDb.pl - lines changed 10, context: html, text, full: html, text
• initial db build for chimp
  • src/hg/makeDb/doc/panTro3.txt - lines changed 242, context: html, text, full: html, text
• initial contents from makeGenomeDb
  • src/hg/makeDb/trackDb/chimp/panTro3/description.html - lines changed 129, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro3/gap.html - lines changed 64, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro3/gold.html - lines changed 23, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro3/trackDb.ra - lines changed 7, context: html, text, full: html, text
• adding panTro3 to the build
  • src/hg/makeDb/trackDb/makefile - lines changed 1, context: html, text, full: html, text
• edited contents for description gold and gap html pages
  • src/hg/makeDb/trackDb/chimp/panTro3/description.html - lines changed 182, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro3/gap.html - lines changed 61, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro3/gold.html - lines changed 32, context: html, text, full: html, text
• add chrM
  • src/hg/makeDb/trackDb/chimp/panTro3/gold.html - lines changed 1, context: html, text, full: html, text
• finished with repeatMasker
  • src/hg/makeDb/doc/panTro3.txt - lines changed 326, context: html, text, full: html, text