Commits for braney

v248_preview to v248_preview2 (2011-02-22 to 2011-03-01) v248

• fix up default tracks
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGisChiaPet.ra - lines changed 8, context: html, text, full: html, text
• a comment from Angie's code review that I'll implement when I move to get BAM's to display as wigs automagically. Also, a change to the bamWig predraw array that is still not right. :(
  • src/hg/hgTracks/bamTrack.c - lines changed 7, context: html, text, full: html, text
• start human proteins track
  • src/hg/makeDb/doc/panTro3.txt - lines changed 167, context: html, text, full: html, text
• add the combined replicates to download only
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisChiaPet.ra - lines changed 89, context: html, text, full: html, text
• finished exon blast
  • src/hg/makeDb/doc/panTro3.txt - lines changed 6, context: html, text, full: html, text
• output a more efficient bedgraph
  • src/utils/bigWigToBedGraph/bigWigToBedGraph.c - lines changed 26, context: html, text, full: html, text
• backing out pointing things on decipher blocks #1953
  • src/hg/hgTracks/simpleTracks.c - lines changed 27, context: html, text, full: html, text
• v248 preview
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 3, context: html, text, full: html, text