Commits for braney

v248_base to v249_preview (2011-03-08 to 2011-03-15) v249

• copy the alpha cv.ra file into the downloads directory if we're doing a make install. This allows the labs to grab the same cv.ra we're using in the pipeline.
  • src/hg/encode/encodeValidate/makefile - lines changed 3, context: html, text, full: html, text
• don't update the styles with make beta in htdocs
  • src/hg/htdocs/makefile - lines changed 1, context: html, text, full: html, text
• install and alpha put it in /cluster/bin/scripts, otherwise $HOME/bin/scripts
  • src/hg/encode/encodeMkChangeNotes/makefile - lines changed 3, context: html, text, full: html, text
• updated HTML.
  • src/hg/makeDb/trackDb/human/hg19/tfbsConsSites.html - lines changed 195, context: html, text, full: html, text
• dos2unix this puppy
  • src/hg/makeDb/trackDb/human/hg19/tfbsConsSites.html - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• Haib MethylRrbs data
  • src/hg/encode/autoSql/bedRrbs.as - lines changed 15, context: html, text, full: html, text
  • src/hg/encode/autoSql/bedRrbs.sql - lines changed 23, context: html, text, full: html, text
• oops... score field has to be named score
  • src/hg/encode/autoSql/bedRrbs.as - lines changed 2, context: html, text, full: html, text
  • src/hg/encode/autoSql/bedRrbs.sql - lines changed 1, context: html, text, full: html, text
• put out one mapBox per row if there are too many individual items #1279
  • src/hg/hgTracks/bamTrack.c - lines changed 36, context: html, text, full: html, text
  • src/hg/hgc/bamClick.c - lines changed 3, context: html, text, full: html, text
• a little more detail about what metaCheck does
  • src/hg/encode/metaCheck/README.txt - lines changed 26, context: html, text, full: html, text
  • src/hg/encode/metaCheck/metaCheck.c - lines changed 6, context: html, text, full: html, text
• v249 preview
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text