File Changes for tdreszer

v248_base to v249_preview (2011-03-08 to 2011-03-15) v249

• src/hg/hgApi/hgApi.c
  • lines changed 24, context: html, text, full: html, text
    Moved a few functions common to track search and file search into library code. Redesigned a few things to standardize on slPair lists of vals and labels.
  • lines changed 6, context: html, text, full: html, text
    Changed mdb API required this change.
• src/hg/hgFileSearch/hgFileSearch.c
  • lines changed 310, context: html, text, full: html, text
    Moved a few functions common to track search and file search into library code. Redesigned a few things to standardize on slPair lists of vals and labels.
• src/hg/hgFileUi/hgFileUi.c
  • lines changed 8, context: html, text, full: html, text
    Added NAFV link to track description at bottom of page.
• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 2, context: html, text, full: html, text
    SuperTracks offer links to hgFileUi CGI if the tdb says downloadsOnly
  • lines changed 10, context: html, text, full: html, text
    Added support for showing downloadsOnly tracks in hgTracks (but only if they are part of a superTrack with other visible tracks). Also standardized links for downloadsOnly tacks between hgTracks and hgTrackUi
• src/hg/hgTracks/config.c
  • lines changed 43, context: html, text, full: html, text
    Added support for showing downloadsOnly tracks in hgTracks (but only if they are part of a superTrack with other visible tracks). Also standardized links for downloadsOnly tacks between hgTracks and hgTrackUi
• src/hg/hgTracks/searchTracks.c
  • lines changed 353, context: html, text, full: html, text
    Moved a few functions common to track search and file search into library code. Redesigned a few things to standardize on slPair lists of vals and labels.
• src/hg/htdocs/style/HGStyle.css
  • lines changed 2, context: html, text, full: html, text
    The filterBy multi-selects that use ui-dropdownchecklist.js must be initially hidden.
• src/hg/inc/hdb.h
  • lines changed 4, context: html, text, full: html, text
    For download file lookup, beta should look on hgdownloads-test but in beta/ subdirectory.
• src/hg/inc/mdb.h
  • lines changed 5, context: html, text, full: html, text
    Subtle change to the mdbValLabelSearch() API to put the required val in the pair->name and the optional label in the pair->val. This helps standardize other code that deals with val/label pairs, and enables using slPairFind().
  • lines changed 11, context: html, text, full: html, text
    Added const to a couple of APIs and changed some stuff to aid fleUi filterFiles functionality
• src/hg/inc/searchTracks.h
  • lines changed 27, context: html, text, full: html, text
    Moved a few functions common to track search and file search into library code. Redesigned a few things to standardize on slPair lists of vals and labels.
• src/hg/js/hgTracks.js
  • lines changed 1, context: html, text, full: html, text
    redmine 2916. IE is finiky about extra commas.
• src/hg/js/ui.dropdownchecklist.js
  • lines changed 5, context: html, text, full: html, text
    Added filterBy boxes to hgFileUi to allow slimiting the number of files seen on the page
• src/hg/js/utils.js
  • lines changed 169, context: html, text, full: html, text
    Added filterBy boxes to hgFileUi to allow slimiting the number of files seen on the page
  • lines changed 1, context: html, text, full: html, text
    Empty multi-select resulted in browser errors.
• src/hg/lib/fileUi.c
  • lines changed 108, context: html, text, full: html, text
    For download file lookup, beta should look on hgdownloads-test but in beta/ subdirectory.
  • lines changed 152, context: html, text, full: html, text
    Added filterBy boxes to hgFileUi to allow slimiting the number of files seen on the page
  • lines changed 1, context: html, text, full: html, text
    filterFiles boxes should have bold titles. We want people to notice.
  • lines changed 1, context: html, text, full: html, text
    Preview host should not rsync but should use ls into it's filesystem. What about hgwbeta?
• src/hg/lib/hdb.c
  • lines changed 7, context: html, text, full: html, text
    For download file lookup, beta should look on hgdownloads-test but in beta/ subdirectory.
  • lines changed 1, context: html, text, full: html, text
    Kate suggested that 'genome-test' would be retargeted to 'genome-preview' but this hasn't happened yet.
• src/hg/lib/hui.c
  • lines changed 2, context: html, text, full: html, text
    Removing from metadata mdb vars defined as hidden by cvv.ra
  • lines changed 3, context: html, text, full: html, text
    Should be retiring ui.code.js as jquery-ui.js is a superset.
• src/hg/lib/mdb.c
  • lines changed 73, context: html, text, full: html, text
    Subtle change to the mdbValLabelSearch() API to put the required val in the pair->name and the optional label in the pair->val. This helps standardize other code that deals with val/label pairs, and enables using slPairFind().
  • lines changed 2, context: html, text, full: html, text
    Fix a couple of small bugs I just introduced to track/file searches
  • lines changed 65, context: html, text, full: html, text
    Added const to a couple of APIs and changed some stuff to aid fleUi filterFiles functionality
• src/hg/lib/searchTracks.c
  • lines changed 241, context: html, text, full: html, text
    Moved a few functions common to track search and file search into library code. Redesigned a few things to standardize on slPair lists of vals and labels.
  • lines changed 3, context: html, text, full: html, text
    Fix a couple of small bugs I just introduced to track/file searches
  • lines changed 10, context: html, text, full: html, text
    Changed mdb API required this change.
• src/hg/makeDb/mdbUpdate/mdbPrint.c
  • lines changed 19, context: html, text, full: html, text
    Slight change to allow -composite -vars and -var to all work simultaneously to create a single selection.
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra
  • lines changed 6, context: html, text, full: html, text
    Fixed 5 invalid lab vars
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.html
  • lines changed 11, context: html, text, full: html, text
    Minute change to methods and links to genome-preview as cascade of open chrom composites are released.
  • lines changed 1, context: html, text, full: html, text
    Be been botched.
  • lines changed 5, context: html, text, full: html, text
    Requested by Kate is explicit mention that replicates of alignments and raw data are available in downloads. Also noticed that downloads links should have been to hgFileUi
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.html
  • lines changed 7, context: html, text, full: html, text
    Minute change to methods and links to genome-preview as cascade of open chrom composites are released.
  • lines changed 1, context: html, text, full: html, text
    Be been botched.
  • lines changed 8, context: html, text, full: html, text
    Requested by Kate is explicit mention that replicates of alignments and raw data are available in downloads. Also noticed that downloads links should have been to hgFileUi
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html
  • lines changed 9, context: html, text, full: html, text
    Minute change to methods and links to genome-preview as cascade of open chrom composites are released.
  • lines changed 1, context: html, text, full: html, text
    Be been botched.
  • lines changed 8, context: html, text, full: html, text
    Requested by Kate is explicit mention that replicates of alignments and raw data are available in downloads. Also noticed that downloads links should have been to hgFileUi
• src/inc/cheapcgi.h
  • lines changed 9, context: html, text, full: html, text
    Added lib routine for creating a single/multiple drop down, where the multiple will be expected to be converted into a ui-dropdownchecklist.js type multi-select
• src/lib/cheapcgi.c
  • lines changed 74, context: html, text, full: html, text
    Added lib routine for creating a single/multiple drop down, where the multiple will be expected to be converted into a ui-dropdownchecklist.js type multi-select