Commits for kate
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v249_preview to v249_preview2 (2011-03-15 to 2011-03-22) v249
- Beginnings of ENCODE experiment table
- src/hg/encode/encodeExp/encodeExp.c - lines changed 151, context: html, text, full: html, text
- src/hg/encode/encodeExp/makefile - lines changed 12, context: html, text, full: html, text
- src/hg/inc/encode/encodeExp.h - lines changed 100, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.as - lines changed 10, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.c - lines changed 290, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.sql - lines changed 16, context: html, text, full: html, text
- Merge branch 'master' into exp
- Incremental change
- src/hg/encode/encodeExp/encodeExp.c - lines changed 63, context: html, text, full: html, text
- src/hg/inc/encode/encodeExp.h - lines changed 18, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.as - lines changed 2, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.c - lines changed 99, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.sql - lines changed 2, context: html, text, full: html, text
- Merge branch 'master' into exp
- Merge branch 'master' into exp
- Merge branch 'master' into exp
- Major update: 1. Add metaFind option 2. Add table-driven ra conversion to remove repetitive field refs (a step toward 'once-and-only-once') 3. Add test
- src/hg/encode/encodeExp/encodeExp.c - lines changed 210, context: html, text, full: html, text
- src/hg/encode/encodeExp/makefile - lines changed 3, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/expected/addTest.out.ra - lines changed 16, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/input/addTest.in.ra - lines changed 16, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/makefile - lines changed 22, context: html, text, full: html, text
- src/hg/inc/encode/encodeExp.h - lines changed 22, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.c - lines changed 131, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.sql - lines changed 1, context: html, text, full: html, text
- Wrangling UW 5C
- src/hg/encode/DAFs/2.0/uw5cSample.ddf - lines changed 3, context: html, text, full: html, text
- Merge branch 'master' into exp
- Add -composite to encodeExp. Extract modules to lib.
- src/hg/encode/encodeExp/encodeExp.c - lines changed 108, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/makefile - lines changed 3, context: html, text, full: html, text
- src/hg/inc/encode/encodeExp.h - lines changed 17, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.c - lines changed 94, context: html, text, full: html, text
- Finish up API for encodeExp lib. Cleanup utility. Still needs testing
- src/hg/encode/encodeExp/encodeExp.c - lines changed 83, context: html, text, full: html, text
- src/hg/inc/encode/encodeExp.h - lines changed 24, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.c - lines changed 101, context: html, text, full: html, text
- Schema changes: add lastUpdate time, rename vars to factors to distinguish from mdbVars. Change accession format to be clearer to end-users. Extend 'find' and 'add' to check if already experiment is already present. Add lib routines to update entries in a limited fashion.
- src/hg/encode/encodeExp/encodeExp.c - lines changed 22, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/expected/addTest.out.ra - lines changed 4, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/input/addTest.in.ra - lines changed 2, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/makefile - lines changed 3, context: html, text, full: html, text
- src/hg/inc/encode/encodeExp.h - lines changed 17, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.as - lines changed 2, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.c - lines changed 128, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.sql - lines changed 4, context: html, text, full: html, text
- Merge branch 'master' into exp
- Some cleanup
- src/hg/lib/encode/encodeExp.c - lines changed 12, context: html, text, full: html, text
- Add links to test downloads ('preview')
- src/hg/htdocs/ENCODE/downloads.html - lines changed 8, context: html, text, full: html, text
- Field rename and accession format change, by request of JK
- src/hg/encode/encodeExp/encodeExp.c - lines changed 8, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/expected/addTest.out.ra - lines changed 4, context: html, text, full: html, text
- src/hg/encode/encodeExp/tests/input/addTest.in.ra - lines changed 2, context: html, text, full: html, text
- src/hg/inc/encode/encodeExp.h - lines changed 8, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.as - lines changed 1, context: html, text, full: html, text
- src/hg/lib/encode/encodeExp.c - lines changed 58, context: html, text, full: html, text
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