Commits for cline
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v250_base to v251_preview (2011-04-19 to 2011-04-26) v251
- Added two new Stam lab protocol documents
- src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 2, context: html, text, full: html, text
- Generate PSL files for the Rfam and tRNA input data, add them to the input to txInfoAssemble.
- src/hg/makeDb/doc/ucscGenes/hg19.ucscGenes13.csh - lines changed 75, context: html, text, full: html, text
- Changed the genome in the zdb variable from rn4 to rheMac2, as instructed by Jim. Generated PSLs for the Rfam and tRNA input alignments, and added them to the inputs of txInfoAssemble.
- Added rfam and trna to the expected accessions
- src/hg/txGraph/txWalk/txWalk.c - lines changed 3, context: html, text, full: html, text
- Checking in a new header comment for Morgan
- src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 40, context: html, text, full: html, text
- Revised the tag for term BaseOverlapSignal so it will pass Morgan's validator
- src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 3, context: html, text, full: html, text
- Accepting some provisional changes, with slight modifications to shorten the tags
- src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 8, context: html, text, full: html, text
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