a5145c7f2d426a0e125046897f02bcdd5727ab90
hiram
Wed Apr 20 16:02:20 2011 -0700
calJac3 also now has a ucscToEnsembl table, this needs to be a trackDb variable ...
diff --git src/hg/hgTracks/hgTracks.c src/hg/hgTracks/hgTracks.c
index 49c45bd..74cb8d7 100644
--- src/hg/hgTracks/hgTracks.c
+++ src/hg/hgTracks/hgTracks.c
@@ -3555,31 +3555,31 @@
{
/* Print Ensembl anchor for latest assembly of organisms we have
* supported by Ensembl == if versionString from trackVersion exists */
if (sameWord(database,"hg19"))
{
hPrintf("
");
printEnsemblAnchor(database, NULL, chromName, winStart, winEnd);
hPrintf("%s | ", "Ensembl");
}
else if (sameWord(database,"hg18"))
{
hPrintf(" ");
printEnsemblAnchor(database, "ncbi36", chromName, winStart, winEnd);
hPrintf("%s | ", "Ensembl");
}
- else if (sameWord(database,"anoCar2"))
+ else if (sameWord(database,"anoCar2") || sameWord(database,"calJac3"))
{
hPrintf(" ");
printEnsemblAnchor(database, NULL, chromName, winStart, winEnd);
hPrintf("%s | ", "Ensembl");
}
else if (ensVersionString[0])
{
char *archive = NULL;
if (ensDateReference[0] && differentWord("current", ensDateReference))
archive = cloneString(ensDateReference);
/* Can we perhaps map from a UCSC random chrom to an Ensembl contig ? */
if (sameWord(database,"oryCun2") || isUnknownChrom(database, chromName))
{
// which table to check
char *ctgPos = "ctgPos";