File Changes for kate

v251_preview to v251_preview2 (2011-04-26 to 2011-05-03) v251

• src/hg/encode/encodeCharts/important.dates.tab
  • lines changed 1, context: html, text, full: html, text
    Update data file for Bernard's ENCODE charting
• src/hg/encode/encodeExp/encodeExp.c
  • lines changed 90, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
  • lines changed 51, context: html, text, full: html, text
    Add 'why' column to experiment history table. Add 'restore' command to tool (this loads an empty table from a .ra file)
  • lines changed 13, context: html, text, full: html, text
    Cosmetic fixes to usage. Make defaults safer
• src/hg/encode/encodeExp/tests/expected/accTest.out.ra
  • lines changed 21, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
• src/hg/encode/encodeExp/tests/expected/copyTest.out.ra
  • lines changed 20, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
• src/hg/encode/encodeExp/tests/expected/removeTest.out.ra
  • lines changed 13, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
• src/hg/encode/encodeExp/tests/expected/renameTest.out.ra
  • lines changed 20, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
• src/hg/encode/encodeExp/tests/expected/restoreTest.out.ra
  • lines changed 44, context: html, text, full: html, text
    Add 'why' column to experiment history table. Add 'restore' command to tool (this loads an empty table from a .ra file)
• src/hg/encode/encodeExp/tests/input/restoreTest.in.ra
  • lines changed 62, context: html, text, full: html, text
    Add 'why' column to experiment history table. Add 'restore' command to tool (this loads an empty table from a .ra file)
• src/hg/encode/encodeExp/tests/makefile
  • lines changed 27, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
  • lines changed 17, context: html, text, full: html, text
    Add 'why' column to experiment history table. Add 'restore' command to tool (this loads an empty table from a .ra file)
• src/hg/htdocs/ENCODE/index.html
  • lines changed 4, context: html, text, full: html, text
    Add 2011 survey link
  • lines changed 3, context: html, text, full: html, text
    Add 2011 survey link
• src/hg/inc/encode/encodeExp.h
  • lines changed 12, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
• src/hg/inc/jksql.h
  • lines changed 3, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
• src/hg/lib/encode/encodeExp.c
  • lines changed 229, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'
  • lines changed 33, context: html, text, full: html, text
    Add 'why' column to experiment history table. Add 'restore' command to tool (this loads an empty table from a .ra file)
• src/hg/lib/jksql.c
  • lines changed 13, context: html, text, full: html, text
    Add commands to encodeExp lib and tool: copy (for backup), remove (whack experiment from table), deacc (was 'revoke'). Expand 'history' command. Fixes to action and user logging in history table'