Commits for vsmalladi

v251_preview to v251_preview2 (2011-04-26 to 2011-05-03) v251

• Fixed wgEncodeHaibTfbsPanc1ControlPcr1xRawRep2 to be protocol=Pcr1x to protocol=Pcr2x and match metaData for SL523.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 47, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.ra - lines changed 2, context: html, text, full: html, text
• Added 7 input experiments previously missing for this track.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 911, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.ra - lines changed 64, context: html, text, full: html, text
• Updated the CTCF replicate experiments with the correct labExpId. Replicate 1 and Replicate 2 labExpId's were switched.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 17, context: html, text, full: html, text
• Accidently typed SL1204 and Sl1205 as SL1024 and SL1025 in last commit.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 9, context: html, text, full: html, text
• Revoked SL305 Peaks and SL3988 experiment on request by the lab.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 117, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.ra - lines changed 26, context: html, text, full: html, text
• Added new sequence platform Illumina HiSeq 2000
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 6, context: html, text, full: html, text
• Updated Notes and configuration for the track. Updated Long and Short labels to follow labelling standards and added fileSortOrder option.
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.ra - lines changed 93, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.ra - lines changed 92, context: html, text, full: html, text
• Merge branch 'master' into Development-Mouse
• Added 7 new submissions. Updating track long labels and defautl tracks on.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 443, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 599, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.ra - lines changed 46, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.ra - lines changed 64, context: html, text, full: html, text
• Added tier 3 cell line PBMC.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 12, context: html, text, full: html, text
• Added Spleen Inputs and experiments to TFBS and Histone tracks.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 443, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 131, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.ra - lines changed 46, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.ra - lines changed 9, context: html, text, full: html, text
• Added 6 new experiments.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 731, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.newR2.ra - lines changed 91, context: html, text, full: html, text
• Fixed short label length for 4-hydroxytamoxifen experiments. Changed short label abbreviation of treatment from OHTAM -> OHT
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.new.ra - lines changed 7, context: html, text, full: html, text