9b6958624673a00fdbe8447b7167e08301fd84bb baertsch Fri May 20 13:31:58 2011 -0700 retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes. diff --git src/hg/hgTracks/retroGene.h src/hg/hgTracks/retroGene.h index 761666d..df556b7 100644 --- src/hg/hgTracks/retroGene.h +++ src/hg/hgTracks/retroGene.h @@ -1,37 +1,38 @@ #ifndef RETROGENE_H #define RETROGENE_H #include "common.h" #include "linefile.h" #include "portable.h" #include "memalloc.h" #include "localmem.h" #include "obscure.h" #include "dystring.h" #include "hash.h" #include "jksql.h" #include "chromColors.h" #include "hdb.h" #include "hgTracks.h" +#include "ucscRetroInfo.h" #include "retroMrnaInfo.h" #endif /* RETROGENE_H */ -#define retroInfoTblSetting "retroMrnaInfo" +#define retroInfoTblSetting "ucscRetroInfo" extern char *protDbName; /* Name of proteome database for this genome. */ -struct linkedFeatures *lfFromRetroGene(struct retroMrnaInfo *pg); +struct linkedFeatures *lfFromRetroGene(struct ucscRetroInfo *pg); /* Return a linked feature from a retroGene. */ void lfRetroGene(struct track *tg); /* Load the items in one custom track - just move beds in * window... */ void lookupRetroNames(struct track *tg); /* This converts the accession to a gene name where possible. */ void loadRetroGene(struct track *tg); /* Load up RetroGenes. */ void retroGeneMethods(struct track *tg); /* Make track of retroGenes from bed */