File Changes for hiram
switch to commits view, user indexv252_preview to v252_preview2 (2011-05-17 to 2011-05-31) v252
- src/hg/cartDump/cartDump.c
- lines changed 1, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/hg/hgSession/hgSession.c
- lines changed 4, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/hg/hgTables/galaxy.c
- lines changed 1, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/hg/hgTables/great.c
- lines changed 1, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/hg/hgTables/hgTables.c
- lines changed 1, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/hg/hgTracks/hgTracks.c
- lines changed 5, context: html, text, full: html, text
provide WormBase link for cb4
- lines changed 1, context: html, text, full: html, text
no need to strip chr from cb4 chrom names for WormBase
- src/hg/hgc/wikiTrack.c
- lines changed 1, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/hg/htdocs/images/phylo/anoCar2_7way.png
- lines changed 0, context: html, text, full: html, text
phylo image for anoCar2 7-way
- src/hg/lib/wikiLink.c
- lines changed 8, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/hg/makeDb/doc/anoCar2.txt
- lines changed 12, context: html, text, full: html, text
multiz run complete for 7-way
- lines changed 90, context: html, text, full: html, text
adding annotation rows to 7-way maf file
- lines changed 77, context: html, text, full: html, text
done with gene annotations on the 7-way maf
- lines changed 369, context: html, text, full: html, text
phylo tree estimate and phastCons done
- lines changed 64, context: html, text, full: html, text
construct download files for 7-way
- lines changed 1, context: html, text, full: html, text
5000 and loose for gasAcu1 summary
- src/hg/makeDb/doc/caeJap4.txt
- lines changed 231, context: html, text, full: html, text
initial sequence is ready for genbank run
- src/hg/makeDb/doc/caePb3.txt
- lines changed 230, context: html, text, full: html, text
ready for genbank run as soon as kluster node rsync is done
- src/hg/makeDb/doc/caeRem4.txt
- lines changed 61, context: html, text, full: html, text
initial makeGenomeDb.pl run
- lines changed 76, context: html, text, full: html, text
running genbank alignments
- src/hg/makeDb/doc/caeSp111.txt
- lines changed 299, context: html, text, full: html, text
ready for window masker cleaning
- src/hg/makeDb/doc/caeSp71.txt
- lines changed 3, context: html, text, full: html, text
ready for window masker cleaning
- src/hg/makeDb/doc/caeSp91.txt
- lines changed 300, context: html, text, full: html, text
ready for window masker cleaning
- src/hg/makeDb/doc/cb3.txt
- lines changed 17, context: html, text, full: html, text
liftover cb3 to cb4 and genbank done for ce10
- src/hg/makeDb/doc/cb4.txt
- src/hg/makeDb/doc/ce10.txt
- lines changed 79, context: html, text, full: html, text
ready for kluster activity
- lines changed 73, context: html, text, full: html, text
running genbank and set default position
- lines changed 5, context: html, text, full: html, text
set this as defaultDb in gateway page
- lines changed 13, context: html, text, full: html, text
liftover cb3 to cb4 and genbank done for ce10
- src/hg/makeDb/doc/ce4.txt
- src/hg/makeDb/doc/ce6.txt
- src/hg/makeDb/doc/ce9.txt
- src/hg/makeDb/doc/ornAna1.txt
- lines changed 1, context: html, text, full: html, text
small correction to an old command
- src/hg/makeDb/genbank/etc/align.dbs
- lines changed 1, context: html, text, full: html, text
Added ce10 - C. elegans WS220
- lines changed 1, context: html, text, full: html, text
Added cb4 - C. briggsae WS220
- lines changed 1, context: html, text, full: html, text
Added caeRem4 C. remanei WS220
- lines changed 1, context: html, text, full: html, text
adding caePb3 C. brenneri WS220
- src/hg/makeDb/genbank/etc/genbank.conf
- lines changed 2, context: html, text, full: html, text
adding ensGene for upstream table on anoCar2
- lines changed 17, context: html, text, full: html, text
Added ce10 C. elegans WS220
- lines changed 22, context: html, text, full: html, text
adding cb4 C. briggsae WS225
- lines changed 19, context: html, text, full: html, text
Added caeRem4 C. remanei WS220
- lines changed 19, context: html, text, full: html, text
Added caePb3 C. brenneri WS220
- src/hg/makeDb/genbank/etc/hgwdev.dbs
- lines changed 1, context: html, text, full: html, text
Added ce10 - C. elegans WS220
- lines changed 1, context: html, text, full: html, text
Added cb4 - C. briggsae WS220
- lines changed 1, context: html, text, full: html, text
Added caeRem4 C. remanei WS220
- lines changed 1, context: html, text, full: html, text
adding caePb3 C. brenneri WS220
- src/hg/makeDb/trackDb/chimp/trackDb.chainNet.ra
- lines changed 1, context: html, text, full: html, text
override matrix for rheMac2
- src/hg/makeDb/trackDb/lizard/anoCar2/cons7way.html
- lines changed 395, context: html, text, full: html, text
description page ready to go for 7-way
- src/hg/makeDb/trackDb/lizard/anoCar2/description.html
- lines changed 5, context: html, text, full: html, text
add notes about future names of several chrLG chroms
- src/hg/makeDb/trackDb/lizard/anoCar2/trackDb.ra
- lines changed 104, context: html, text, full: html, text
adding 7-way conservation definitions
- src/hg/makeDb/trackDb/makefile
- lines changed 1, context: html, text, full: html, text
adding ce10 to the browser
- lines changed 1, context: html, text, full: html, text
adding caeRem4 to the build
- lines changed 1, context: html, text, full: html, text
adding caeJap4 to the build
- lines changed 1, context: html, text, full: html, text
adding caeSp71 to the build
- lines changed 2, context: html, text, full: html, text
adding caeSp91 and caeSp111
- src/hg/makeDb/trackDb/worm/caeJap4/description.html
- lines changed 129, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- lines changed 71, context: html, text, full: html, text
adding caeJap4 to the build
- src/hg/makeDb/trackDb/worm/caeJap4/gap.html
- lines changed 64, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- lines changed 62, context: html, text, full: html, text
adding caeJap4 to the build
- src/hg/makeDb/trackDb/worm/caeJap4/gold.html
- lines changed 23, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- lines changed 28, context: html, text, full: html, text
adding caeJap4 to the build
- src/hg/makeDb/trackDb/worm/caeJap4/trackDb.ra
- lines changed 40, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caePb3/description.html
- lines changed 129, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caePb3/gap.html
- lines changed 64, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caePb3/gold.html
- lines changed 23, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caePb3/trackDb.ra
- lines changed 40, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeRem4/description.html
- lines changed 129, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- lines changed 65, context: html, text, full: html, text
Updated descriptions to match this release
- src/hg/makeDb/trackDb/worm/caeRem4/gap.html
- lines changed 64, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- lines changed 56, context: html, text, full: html, text
Updated descriptions to match this release
- src/hg/makeDb/trackDb/worm/caeRem4/gold.html
- lines changed 23, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- lines changed 40, context: html, text, full: html, text
Updated descriptions to match this release
- src/hg/makeDb/trackDb/worm/caeRem4/trackDb.ra
- lines changed 40, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp111/description.html
- lines changed 129, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp111/gap.html
- lines changed 64, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp111/gold.html
- lines changed 23, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp111/trackDb.ra
- lines changed 40, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp71/description.html
- lines changed 129, context: html, text, full: html, text
initial source from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp71/gap.html
- lines changed 64, context: html, text, full: html, text
initial source from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp71/gold.html
- lines changed 23, context: html, text, full: html, text
initial source from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp71/trackDb.ra
- lines changed 40, context: html, text, full: html, text
initial source from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp91/description.html
- lines changed 129, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp91/gap.html
- lines changed 64, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp91/gold.html
- lines changed 23, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/caeSp91/trackDb.ra
- lines changed 40, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/cb4/description.html
- lines changed 129, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/cb4/gap.html
- lines changed 64, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/cb4/gold.html
- lines changed 23, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- src/hg/makeDb/trackDb/worm/cb4/trackDb.ra
- lines changed 8, context: html, text, full: html, text
initial files from makeGenomeDb.pl
- lines changed 2, context: html, text, full: html, text
default vis for gold and gap
- src/hg/makeDb/trackDb/worm/ce10/description.html
- lines changed 129, context: html, text, full: html, text
initial contents from makeGenomeDb
- lines changed 106, context: html, text, full: html, text
update doc to represent actual assembly
- src/hg/makeDb/trackDb/worm/ce10/gap.html
- lines changed 64, context: html, text, full: html, text
initial contents from makeGenomeDb
- src/hg/makeDb/trackDb/worm/ce10/gold.html
- lines changed 23, context: html, text, full: html, text
initial contents from makeGenomeDb
- src/hg/makeDb/trackDb/worm/ce10/trackDb.ra
- lines changed 8, context: html, text, full: html, text
initial contents from makeGenomeDb
- src/inc/cheapcgi.h
- lines changed 5, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/lib/cheapcgi.c
- lines changed 20, context: html, text, full: html, text
changing uses of cgiServerName to better cgiServerNamePort
- src/product/ex.hg.conf
- lines changed 11, context: html, text, full: html, text
add notes about how the wiki cookie names are constructed
switch to commits view, user index