9cc2351f465f585965408ff48fea2ad79a1aaa91 markd Mon Jun 6 17:40:11 2011 -0700 meger of GENCODE V7 tracks diff --git src/hg/hgc/hgc.h src/hg/hgc/hgc.h index ed9847a..965d1ed 100644 --- src/hg/hgc/hgc.h +++ src/hg/hgc/hgc.h @@ -97,30 +97,33 @@ void showSomeAlignment(struct psl *psl, bioSeq *oSeq, enum gfType qType, int qStart, int qEnd, char *qName, int cdsS, int cdsE); /* Display protein or DNA alignment in a frame. */ void linkToOtherBrowserTitle(char *otherDb, char *chrom, int start, int end, char *title); /* Make anchor tag to open another browser window with a title. */ void linkToOtherBrowser(char *otherDb, char *chrom, int start, int end); /* Make anchor tag to open another browser window. */ void printEntrezPubMedUidUrl(FILE *f, int pmid); /* Print URL for Entrez browser on a PubMed search. */ +void printSwissProtAccUrl(FILE *f, char *accession); +/* Print URL for Swiss-Prot protein accession. */ + boolean clipToChrom(int *pStart, int *pEnd); /* Clip start/end coordinates to fit in chromosome. */ void printCappedSequence(int start, int end, int extra); /* Print DNA from start to end including extra at either end. * Capitalize bits from start to end. */ void printPos(char *chrom, int start, int end, char *strand, boolean featDna, char *item); /* Print position lines. 'strand' argument may be null. */ void bedPrintPos(struct bed *bed, int bedSize, struct trackDb *tdb); /* Print first three fields of a bed type structure in * standard format. */