9cc2351f465f585965408ff48fea2ad79a1aaa91 markd Mon Jun 6 17:40:11 2011 -0700 meger of GENCODE V7 tracks diff --git src/hg/inc/wgEncodeGencodeGeneSymbol.h src/hg/inc/wgEncodeGencodeGeneSymbol.h deleted file mode 100644 index 9d4866c..0000000 --- src/hg/inc/wgEncodeGencodeGeneSymbol.h +++ /dev/null @@ -1,62 +0,0 @@ -/* wgEncodeGencodeGeneSymbol.h was originally generated by the autoSql program, which also - * generated wgEncodeGencodeGeneSymbol.c and wgEncodeGencodeGeneSymbol.sql. This header links the database and - * the RAM representation of objects. */ - -#ifndef WGENCODEGENCODEGENESYMBOL_H -#define WGENCODEGENCODEGENESYMBOL_H - -#define WGENCODEGENCODEGENESYMBOL_NUM_COLS 2 - -struct wgEncodeGencodeGeneSymbol -/* Gencode metadata table of HGNC gene symbols for Gencode Genes */ - { - struct wgEncodeGencodeGeneSymbol *next; /* Next in singly linked list. */ - char *transcriptId; /* Transcript ID for Gencode gene */ - char *id; /* HGNC gene symbol */ - }; - -void wgEncodeGencodeGeneSymbolStaticLoad(char **row, struct wgEncodeGencodeGeneSymbol *ret); -/* Load a row from wgEncodeGencodeGeneSymbol table into ret. The contents of ret will - * be replaced at the next call to this function. */ - -struct wgEncodeGencodeGeneSymbol *wgEncodeGencodeGeneSymbolLoad(char **row); -/* Load a wgEncodeGencodeGeneSymbol from row fetched with select * from wgEncodeGencodeGeneSymbol - * from database. Dispose of this with wgEncodeGencodeGeneSymbolFree(). */ - -struct wgEncodeGencodeGeneSymbol *wgEncodeGencodeGeneSymbolLoadAll(char *fileName); -/* Load all wgEncodeGencodeGeneSymbol from whitespace-separated file. - * Dispose of this with wgEncodeGencodeGeneSymbolFreeList(). */ - -struct wgEncodeGencodeGeneSymbol *wgEncodeGencodeGeneSymbolLoadAllByChar(char *fileName, char chopper); -/* Load all wgEncodeGencodeGeneSymbol from chopper separated file. - * Dispose of this with wgEncodeGencodeGeneSymbolFreeList(). */ - -#define wgEncodeGencodeGeneSymbolLoadAllByTab(a) wgEncodeGencodeGeneSymbolLoadAllByChar(a, '\t'); -/* Load all wgEncodeGencodeGeneSymbol from tab separated file. - * Dispose of this with wgEncodeGencodeGeneSymbolFreeList(). */ - -struct wgEncodeGencodeGeneSymbol *wgEncodeGencodeGeneSymbolCommaIn(char **pS, struct wgEncodeGencodeGeneSymbol *ret); -/* Create a wgEncodeGencodeGeneSymbol out of a comma separated string. - * This will fill in ret if non-null, otherwise will - * return a new wgEncodeGencodeGeneSymbol */ - -void wgEncodeGencodeGeneSymbolFree(struct wgEncodeGencodeGeneSymbol **pEl); -/* Free a single dynamically allocated wgEncodeGencodeGeneSymbol such as created - * with wgEncodeGencodeGeneSymbolLoad(). */ - -void wgEncodeGencodeGeneSymbolFreeList(struct wgEncodeGencodeGeneSymbol **pList); -/* Free a list of dynamically allocated wgEncodeGencodeGeneSymbol's */ - -void wgEncodeGencodeGeneSymbolOutput(struct wgEncodeGencodeGeneSymbol *el, FILE *f, char sep, char lastSep); -/* Print out wgEncodeGencodeGeneSymbol. Separate fields with sep. Follow last field with lastSep. */ - -#define wgEncodeGencodeGeneSymbolTabOut(el,f) wgEncodeGencodeGeneSymbolOutput(el,f,'\t','\n'); -/* Print out wgEncodeGencodeGeneSymbol as a line in a tab-separated file. */ - -#define wgEncodeGencodeGeneSymbolCommaOut(el,f) wgEncodeGencodeGeneSymbolOutput(el,f,',',','); -/* Print out wgEncodeGencodeGeneSymbol as a comma separated list including final comma. */ - -/* -------------------------------- End autoSql Generated Code -------------------------------- */ - -#endif /* WGENCODEGENCODEGENESYMBOL_H */ -