9cc2351f465f585965408ff48fea2ad79a1aaa91 markd Mon Jun 6 17:40:11 2011 -0700 meger of GENCODE V7 tracks diff --git src/hg/inc/wgEncodeGencodeSource.h src/hg/inc/wgEncodeGencodeSource.h deleted file mode 100644 index 1e29dfb..0000000 --- src/hg/inc/wgEncodeGencodeSource.h +++ /dev/null @@ -1,68 +0,0 @@ -/* wgEncodeGencodeSource.h was originally generated by the autoSql program, which also - * generated wgEncodeGencodeSource.c and wgEncodeGencodeSource.sql. This header links the database and - * the RAM representation of objects. */ - -#ifndef WGENCODEGENCODESOURCE_H -#define WGENCODEGENCODESOURCE_H - -#define WGENCODEGENCODESOURCE_NUM_COLS 2 - -enum wgEncodeGencodeSourceSource - { - wgEncodeGencodeSourceEnsembl = 0, - wgEncodeGencodeSourceShares_CDS = 1, - wgEncodeGencodeSourceShares_CDS_and_UTR = 2, - }; -struct wgEncodeGencodeSource -/* Gencode metadata table of the source of Gencode Gene transcripts */ - { - struct wgEncodeGencodeSource *next; /* Next in singly linked list. */ - char *transcriptId; /* Transcript ID for Gencode gene */ - enum wgEncodeGencodeSourceSource source; /* Source of transcript */ - }; - -void wgEncodeGencodeSourceStaticLoad(char **row, struct wgEncodeGencodeSource *ret); -/* Load a row from wgEncodeGencodeSource table into ret. The contents of ret will - * be replaced at the next call to this function. */ - -struct wgEncodeGencodeSource *wgEncodeGencodeSourceLoad(char **row); -/* Load a wgEncodeGencodeSource from row fetched with select * from wgEncodeGencodeSource - * from database. Dispose of this with wgEncodeGencodeSourceFree(). */ - -struct wgEncodeGencodeSource *wgEncodeGencodeSourceLoadAll(char *fileName); -/* Load all wgEncodeGencodeSource from whitespace-separated file. - * Dispose of this with wgEncodeGencodeSourceFreeList(). */ - -struct wgEncodeGencodeSource *wgEncodeGencodeSourceLoadAllByChar(char *fileName, char chopper); -/* Load all wgEncodeGencodeSource from chopper separated file. - * Dispose of this with wgEncodeGencodeSourceFreeList(). */ - -#define wgEncodeGencodeSourceLoadAllByTab(a) wgEncodeGencodeSourceLoadAllByChar(a, '\t'); -/* Load all wgEncodeGencodeSource from tab separated file. - * Dispose of this with wgEncodeGencodeSourceFreeList(). */ - -struct wgEncodeGencodeSource *wgEncodeGencodeSourceCommaIn(char **pS, struct wgEncodeGencodeSource *ret); -/* Create a wgEncodeGencodeSource out of a comma separated string. - * This will fill in ret if non-null, otherwise will - * return a new wgEncodeGencodeSource */ - -void wgEncodeGencodeSourceFree(struct wgEncodeGencodeSource **pEl); -/* Free a single dynamically allocated wgEncodeGencodeSource such as created - * with wgEncodeGencodeSourceLoad(). */ - -void wgEncodeGencodeSourceFreeList(struct wgEncodeGencodeSource **pList); -/* Free a list of dynamically allocated wgEncodeGencodeSource's */ - -void wgEncodeGencodeSourceOutput(struct wgEncodeGencodeSource *el, FILE *f, char sep, char lastSep); -/* Print out wgEncodeGencodeSource. Separate fields with sep. Follow last field with lastSep. */ - -#define wgEncodeGencodeSourceTabOut(el,f) wgEncodeGencodeSourceOutput(el,f,'\t','\n'); -/* Print out wgEncodeGencodeSource as a line in a tab-separated file. */ - -#define wgEncodeGencodeSourceCommaOut(el,f) wgEncodeGencodeSourceOutput(el,f,',',','); -/* Print out wgEncodeGencodeSource as a comma separated list including final comma. */ - -/* -------------------------------- End autoSql Generated Code -------------------------------- */ - -#endif /* WGENCODEGENCODESOURCE_H */ -