Commits for rhead

v252_base to v253_preview (2011-06-07 to 2011-06-14) v253

• Added default combine line to rinnSexGroups stanza to keep track working in v252 CGIs (redmine 4027, note-22).
  • src/hg/makeDb/hgCgiData/Mouse/microarrayGroups.ra - lines changed 1, context: html, text, full: html, text
• Removing combine line from rinnSexGroups stanza. This was just a temporary fix for v252 CGIs, and it has already been cherry-picked into that release. (Redmine #4027, note-45.)
  • src/hg/makeDb/hgCgiData/Mouse/microarrayGroups.ra - lines changed 1, context: html, text, full: html, text
• Removed the hg18 copy of omimDescriptionText.html and changed hg18 omimAvSnp.html so that it uses the one at the human level. No reason to have multiple copies of the same included text.
  • src/hg/makeDb/trackDb/human/hg18/omimAvSnp.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/omimDescriptionText.html - lines changed 21, context: html, text, full: html, text
• Bolded track name, reordered references, reworded methods and display sections.
  • src/hg/makeDb/trackDb/human/omimAvSnp.html - lines changed 25, context: html, text, full: html, text
• Added missing </P> tag.
  • src/hg/makeDb/trackDb/human/omimGene2.html - lines changed 3, context: html, text, full: html, text
• Made full/pack mode description consistent with other omim tracks.
  • src/hg/makeDb/trackDb/human/omimAvSnp.html - lines changed 4, context: html, text, full: html, text
• Bolded track name, reordered references, small grammar/punctuation fixes, made wording consistent with other omim tracks, reworded methods, removed reference to ftp file that is no longer available (Redmine #2153, note-132).
  • src/hg/makeDb/trackDb/human/omimLocation.html - lines changed 31, context: html, text, full: html, text
• Made the main description of the track more precise, moved the link to dbSNP up, pointed out that our dbSNP link is to the details page of the All SNPs (132) track.
  • src/hg/makeDb/trackDb/human/omimAvSnp.html - lines changed 9, context: html, text, full: html, text
• Changed to match human-level omimAvSnp.html. Moved warning up.
  • src/hg/makeDb/trackDb/human/hg18/omimAvSnp.html - lines changed 38, context: html, text, full: html, text
• Clarified the first description sentence and removed the line in the methods section about mim2gene, as per redmine #2153, note-156.
  • src/hg/makeDb/trackDb/human/omimLocation.html - lines changed 5, context: html, text, full: html, text
• Fixed typo.
  • src/hg/lib/omimPhenotype.as - lines changed 1, context: html, text, full: html, text