Commits for cricket

v254_preview to v254_preview2 (2011-07-05 to 2011-07-12) v254

• Adding readType and seqPlatform
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 1536, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra - lines changed 437, context: html, text, full: html, text
• Made changes according to ticket 4498
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 9, context: html, text, full: html, text
• Changing a description for ticket 4498
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 1, context: html, text, full: html, text
• Spelling error in the name
  • src/hg/htdocs/ENCODE/transfragBed6CshlDescription.html - lines changed 252, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/transfragBed6CshlDiscription.html - lines changed 252, context: html, text, full: html, text
• Fixed the typo for Discription to Description
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.new.html - lines changed 3, context: html, text, full: html, text
• The changes for the cv this week can be put into 6 basica categories: PROTOCOL All the protocols have been given a standardized naming format of Lab:LabsProtocolName_protocol.pdf. VANESSA REQEUSTS Changes from the revious code review RESEARCHED ADDITIONS Jeff added many vendorNames and lineages KATE REQUESTS Many datatypes and labs were altered to be constent with NHGRI TYPOS Minor changes that hardly show in the diff PROVISIONALS Larger changes or additions to cell lines and views that are still being debated, my understanding is that we mark them with PROVISIONAL so that you can still push and the outside world will see them as provisional.
  • src/hg/makeDb/trackDb/cv/beta/cv.ra - lines changed 324, context: html, text, full: html, text
• Commenting out the BJ terms until resolved ticket #4536
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 60, context: html, text, full: html, text
• Resolving merge conflict over RevXLink.
• Changed Release Notes to Description, changed the location of the PI link to be consistent with the rest of the chart, changed the gencode email to be sanitized
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV7.html - lines changed 7, context: html, text, full: html, text