4cab7f311cadce7428c1d7e1c4dfdcb0d3a43033
angie
  Wed Jul 27 10:32:19 2011 -0700
Feature #3710 (vcfTabix UI options): Added controls for selection of centervariant for haplotype clustering/sorting.  Also, some hgc improvements:
made the Genotype Details table into a collapsible section; better display
of QUAL and FILTER column values, which also involved improving the
representation of those columns in src/inc/vcf.h.

diff --git src/hg/inc/vcfUi.h src/hg/inc/vcfUi.h
new file mode 100644
index 0000000..706a8a6
--- /dev/null
+++ src/hg/inc/vcfUi.h
@@ -0,0 +1,18 @@
+/* vcfUi - Variant Call Format user interface controls that are shared
+ * between more than one CGI. */
+#ifndef VCFUI_H
+#define VCFUI_H
+
+#include "cart.h"
+#include "trackDb.h"
+#include "vcf.h"
+
+void vcfCfgHaplotypeCenter(struct cart *cart, struct trackDb *tdb, struct vcfFile *vcff,
+			   char *thisName, char *thisChrom, int thisPos, char *formName);
+/* If vcff has genotype data, show status and controls for choosing the center variant
+ * for haplotype clustering/sorting in hgTracks. */
+
+void vcfCfgUi(struct cart *cart, struct trackDb *tdb, char *name, char *title, boolean boxed);
+/* Complete track controls for VCF. */
+
+#endif//def VCF_UI