Commits for cricket

v256_preview2 to v256_base (2011-08-23 to 2011-08-29) v256

• Changing the Peak Files from bed9 to broadPeak
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSunyRipSeq.ra - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyRipSeq.new.ra - lines changed 406, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyRipSeq.ra - lines changed 8, context: html, text, full: html, text
• deleting a file that should never have been added
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyRipSeq.new.ra - lines changed 406, context: html, text, full: html, text
• Adding the md5sum changes
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSunyRipSeq.ra - lines changed 7, context: html, text, full: html, text
• New broadPeak files
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeSunyRipSeq.release1.notes - lines changed 8, context: html, text, full: html, text
• Added two missing tracks
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.ra - lines changed 20, context: html, text, full: html, text
• Removing the replicate 131, 132, 102 and 103
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 61, context: html, text, full: html, text
• Release 3 was merged into release 2
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaPet.ra - lines changed 85, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.new.r3.ra - lines changed 2323, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.ra - lines changed 8, context: html, text, full: html, text
• Miss-spelling of Nuleolus as Nucleolos and nlos
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAffyRnaChip.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.ra - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.new.ra - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.new.ra - lines changed 16, context: html, text, full: html, text
• Making description changes for Vanessa
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyRipSeq.html - lines changed 9, context: html, text, full: html, text
• Fixing git merge
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyRipSeq.html - lines changed 14, context: html, text, full: html, text
• Adding the Sam/Bam information
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyRipSeq.html - lines changed 2, context: html, text, full: html, text
• Fixing one thing to show matt
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyGeneSt.new.ra - lines changed 2, context: html, text, full: html, text
• Fixing md5sum per ticket 5040
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 4, context: html, text, full: html, text
• Changing for the new revoke policy
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeSunyAlbanyGeneSt.release2.notes - lines changed 14, context: html, text, full: html, text
• Fixed long labels and typos according to ticket 2019
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.new.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.new.ra - lines changed 156, context: html, text, full: html, text
• Trying to recover this track description
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhRnaSeq.html - lines changed 147, context: html, text, full: html, text
• Changed the last Paired away to aligns
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra - lines changed 55, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.new.ra - lines changed 2, context: html, text, full: html, text