c7b3329205aae76ebdeecbad89ec0dd781b7ab64
tdreszer
  Wed Aug 10 13:52:45 2011 -0700
This is the new patch candidate.
diff --git src/hg/hgTracks/hgTracks.c src/hg/hgTracks/hgTracks.c
index 37da073..413fcb4 100644
--- src/hg/hgTracks/hgTracks.c
+++ src/hg/hgTracks/hgTracks.c
@@ -4149,33 +4149,33 @@
     slSafeAddHead(&trackList, cuttersTg());
     }
 if (wikiTrackEnabled(database, NULL))
     {
     addWikiTrack(&trackList);
     struct sqlConnection *conn = wikiConnect();
     if (sqlTableExists(conn, "variome"))
         addVariomeWikiTrack(&trackList);
     wikiDisconnect(&conn);
     }
 
 if (cartOptionalString(cart, "hgt.trackNameFilter") == NULL)
     { // If a single track was asked for and it is from a hub, then it is already in trackList
     loadTrackHubs(&trackList, &hubList);
     slReverse(&hubList);
-    groupTracks(hubList, &trackList, pGroupList, vis);
     }
 loadCustomTracks(&trackList);
+groupTracks(hubList, &trackList, pGroupList, vis);
 setSearchedTrackToPackOrFull(trackList);
 if (cgiOptionalString( "hideTracks"))
     changeTrackVis(groupList, NULL, tvHide);
 
 /* Get visibility values if any from ui. */
 for (track = trackList; track != NULL; track = track->next)
     {
     char *s = cartOptionalString(cart, track->track);
     if (cgiOptionalString("hideTracks"))
 	{
 	s = cgiOptionalString(track->track);
 	if (s != NULL && (hTvFromString(s) != track->tdb->visibility))
 	    {
 	    cartSetString(cart, track->track, s);
 	    }