File Changes for vsmalladi

v255_base to v256_preview (2011-08-08 to 2011-08-16) v256

• src/hg/encode/DAFs/2.0/caltechMm9Histone.daf
  • lines changed 13, context: html, text, full: html, text
    Updated DAF to match the expected submission like TFBS track.
• src/hg/encode/DAFs/2.0/psuMm9Histone.daf
  • lines changed 3, context: html, text, full: html, text
    Updated DAF to accomated input's replcate and pooled data.
• src/hg/encode/DAFs/2.0/psuMm9Tfbs.daf
  • lines changed 3, context: html, text, full: html, text
    Updated DAF to accomated input's replcate and pooled data.
• src/hg/encode/encodeLoad/makefile
  • lines changed 11, context: html, text, full: html, text
    Modified makefile targets and scripts to place pipeline specific scripts and files under specific pipeline directory.
  • lines changed 1, context: html, text, full: html, text
    Updated make target for Development pipeline from 'pipeline' -> 'development'. This is a far more descriptive target and won't be confused with making production pipeline. Redmine #211
• src/hg/encode/encodeValidate/makefile
  • lines changed 8, context: html, text, full: html, text
    Modified makefile targets and scripts to place pipeline specific scripts and files under specific pipeline directory.
  • lines changed 1, context: html, text, full: html, text
    Updated make target for Development pipeline from 'pipeline' -> 'development'. This is a far more descriptive target and won't be confused with making production pipeline. Redmine #211
  • lines changed 3, context: html, text, full: html, text
    Updated the make targets for the config directory to only use files that are necessary by the pipeline. Redmine #2125, #211.
  • lines changed 1, context: html, text, full: html, text
    Forgot make target for make all.
• src/hg/encode/makefile
  • lines changed 12, context: html, text, full: html, text
    Update makefile for the pipeline to have updated targets that are specified in encodeLoad and encodeValidate. Also removed encodeStatus since this is not a pipeline dependent and added to general DIRS. Redmine #211, #2125.
  • lines changed 2, context: html, text, full: html, text
    Added encodeStatus to DIRS since this should always be made. Redmine #211, #2125.
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
  • lines changed 8, context: html, text, full: html, text
    Updated Tags so that the tables wouldn't have names longer than 64 characters.
  • lines changed 7, context: html, text, full: html, text
    Fixed registration of CEBPD antibody and added information for the CEBPB cell line.
  • lines changed 19, context: html, text, full: html, text
    Registered Erythroblast and added protocols for erythroblast and megakaryocyte primary cells.