Commits for hiram

v257_preview2 to v257_base (2011-09-13 to 2011-09-19) v257

• Added xenTro3
  • src/hg/makeDb/genbank/etc/align.dbs - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/genbank/etc/hgwdev.dbs - lines changed 1, context: html, text, full: html, text
• changing danRer6 to danRer7 and sacCer2 to sacCer3
  • src/hg/hgGene/hgGeneData/C_elegans/ce6/otherOrgs.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/hgGene/hgGeneData/D_melanogaster/dm3/otherOrgs.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/hgGene/hgGeneData/Human/hg19/otherOrgs.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/hgGene/hgGeneData/Mouse/mm9/otherOrgs.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/hgGene/hgGeneData/Rat/rn4/otherOrgs.ra - lines changed 2, context: html, text, full: html, text
• add searching for transRegCodeProbe
  • src/hg/makeDb/trackDb/sacCer/trackDb.ra - lines changed 4, context: html, text, full: html, text
• add rsync of cgi-bin/encode/ directory
  • src/product/scripts/updateHtml.sh - lines changed 10, context: html, text, full: html, text
• done with genbank and added cpgIslands and genscan
  • src/hg/makeDb/doc/xenTro3.txt - lines changed 165, context: html, text, full: html, text
• add microsatellite track
  • src/hg/makeDb/doc/xenTro3.txt - lines changed 10, context: html, text, full: html, text
• adding ucscToEnsembl table
  • src/hg/makeDb/doc/xenTro3.txt - lines changed 22, context: html, text, full: html, text
• adding xenTro3
  • src/hg/makeDb/schema/all.joiner - lines changed 3, context: html, text, full: html, text
• construct download files and place in pushQ
  • src/hg/makeDb/doc/xenTro3.txt - lines changed 38, context: html, text, full: html, text