File Changes for hiram

v256_base to v257_preview (2011-08-29 to 2011-09-06) v257

• src/hg/hgCustom/hgCustom.c
  • lines changed 30, context: html, text, full: html, text
    very initial experiment for progress meter, long way to go
• src/hg/hgGene/hgGeneData/S_cerevisiae/sacCer3/otherOrgs.ra
  • lines changed 17, context: html, text, full: html, text
    turning on sgdGene details page for sacCer3
• src/hg/makeDb/doc/hg18.txt
  • lines changed 68, context: html, text, full: html, text
    adding HapMap recombination maps to deCODE track
• src/hg/makeDb/doc/sacCer1.txt
  • lines changed 12, context: html, text, full: html, text
    liftOver to sacCer3 completed
• src/hg/makeDb/doc/sacCer2.txt
  • lines changed 13, context: html, text, full: html, text
    liftOver to sacCer3 completed
• src/hg/makeDb/doc/sacCer3.txt
  • lines changed 140, context: html, text, full: html, text
    genbank run done, well into the sgdGene construction
  • lines changed 18, context: html, text, full: html, text
    adding clone location track
  • lines changed 11, context: html, text, full: html, text
    adding simpleRepeats
  • lines changed 102, context: html, text, full: html, text
    adding Regulatory Code, Oreganno track and Regulatory Module
  • lines changed 149, context: html, text, full: html, text
    starting the multiple alignment
  • lines changed 106, context: html, text, full: html, text
    pairwise maf alignments are done for the 32 query sequences
  • lines changed 572, context: html, text, full: html, text
    build complete
• src/hg/makeDb/genbank/etc/align.dbs
  • lines changed 1, context: html, text, full: html, text
    Added sacCer3 - S. cerevisiae
• src/hg/makeDb/genbank/etc/hgwdev.dbs
  • lines changed 1, context: html, text, full: html, text
    Added sacCer3 - S. cerevisiae
• src/hg/makeDb/schema/all.joiner
  • lines changed 10, context: html, text, full: html, text
    adding sacCer3
  • lines changed 1, context: html, text, full: html, text
    adding sacCer3 to the ensGeneDb list
• src/hg/makeDb/trackDb/human/decode.rmap.ra
  • lines changed 39, context: html, text, full: html, text
    adding HapMap recomb rate data to decode tracks
• src/hg/makeDb/trackDb/human/decodeRmap.html
  • lines changed 14, context: html, text, full: html, text
    adding comments from Thorgeir
  • lines changed 5, context: html, text, full: html, text
    adding HapMap recomb rate data to decode tracks
• src/hg/makeDb/trackDb/makefile
  • lines changed 1, context: html, text, full: html, text
    adding sacCer3 to the build
• src/hg/makeDb/trackDb/sacCer/sacCer3/description.html
  • lines changed 120, context: html, text, full: html, text
    initial file contents ready to go
• src/hg/makeDb/trackDb/sacCer/sacCer3/gap.html
  • lines changed 11, context: html, text, full: html, text
    initial file contents ready to go
• src/hg/makeDb/trackDb/sacCer/sacCer3/gold.html
  • lines changed 21, context: html, text, full: html, text
    initial file contents ready to go
• src/hg/makeDb/trackDb/sacCer/sacCer3/multiz7way.html
  • lines changed 223, context: html, text, full: html, text
    turning on the 7-way conservation track
• src/hg/makeDb/trackDb/sacCer/sacCer3/sgdGene.html
  • lines changed 14, context: html, text, full: html, text
    turning on the 7-way conservation track
• src/hg/makeDb/trackDb/sacCer/sacCer3/sgdOther.html
  • lines changed 14, context: html, text, full: html, text
    turning on the 7-way conservation track
• src/hg/makeDb/trackDb/sacCer/sacCer3/trackDb.ra
  • lines changed 18, context: html, text, full: html, text
    initial file contents ready to go
  • lines changed 34, context: html, text, full: html, text
    turning on the 7-way conservation track