Commits for vsmalladi

v256_base to v257_preview (2011-08-29 to 2011-09-06) v257

• Removed duplicate registration of E2F6 antibody from Santa Cruz Biotech. Consolidated documents into one line. Updated antibody and target descriptions. Redmine #4995.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 21, context: html, text, full: html, text
• Removed duplicate registration of E2F6 antibody from Santa Cruz Biotech. Consolidated documents into one line. Updated antibody and target descriptions. Redmine #4995.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 21, context: html, text, full: html, text
• Resolved merge conflict with the cv.ra
• Updated description based on Jeff's recommendations. Redmine #5025.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 7, context: html, text, full: html, text
• Updated tags to be shorter and unique based on vendor ID. This will allow for submissions to pass validation.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 5, context: html, text, full: html, text
• Added 31 submission for Caltech TFBS track. First pass at display settings and html
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/makefile - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCaltechTfbs.ra - lines changed 3303, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechTfbs.html - lines changed 152, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechTfbs.ra - lines changed 479, context: html, text, full: html, text
• Added 12 submission for Caltech Histone track. First pass at display settings and html. Redmine #4155
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/makefile - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCaltechHist.ra - lines changed 1369, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/trackDb.wgEncode.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechHist.html - lines changed 152, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechHist.ra - lines changed 272, context: html, text, full: html, text
• recommented first line in cv.ra that was uncommented.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 1, context: html, text, full: html, text
• Replaced submission 3052 with submission 4800.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodePsuTfbs.ra - lines changed 100, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodePsuTfbs.ra - lines changed 36, context: html, text, full: html, text
• Added 2 more submissions that replaced previous submissions.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodePsuTfbs.ra - lines changed 296, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodePsuTfbs.ra - lines changed 78, context: html, text, full: html, text
• Replaced submission 4715 with 4448. 4715 is actually replicate 2 and will need an updated DDF.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCaltechTfbs.ra - lines changed 19, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechTfbs.ra - lines changed 18, context: html, text, full: html, text
• Updated submission 4717 with new metadata and loaded submissions 4715, 4450.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCaltechTfbs.ra - lines changed 144, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechTfbs.ra - lines changed 47, context: html, text, full: html, text
• Updated naming schema of trackDb and metaDb to reflect name of composite as wgEncodeSydhHist instead of wgEncodeSydhHistone. This provides consistency for GEO tools to correctly submit the data. Redmine #4754.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeSydhHist.ra - lines changed 751, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeSydhHistone.ra - lines changed 751, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeSydhHist.ra - lines changed 724, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeSydhHistone.ra - lines changed 724, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/wgEncodeSydhHist.ra - lines changed 724, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/wgEncodeSydhHistone.ra - lines changed 724, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhHist.ra - lines changed 163, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhHistone.ra - lines changed 163, context: html, text, full: html, text