e62655df7abb8c2ab44f5b11798f6f6c731afded
angie
  Wed Oct 5 15:42:05 2011 -0700
Feature #3710 (vcfTabix UI options): added optional filter on min QUAL score.
diff --git src/hg/inc/vcfUi.h src/hg/inc/vcfUi.h
index 02e5afd..cc8fda0 100644
--- src/hg/inc/vcfUi.h
+++ src/hg/inc/vcfUi.h
@@ -1,27 +1,35 @@
 /* vcfUi - Variant Call Format user interface controls that are shared
  * between more than one CGI. */
 #ifndef VCFUI_H
 #define VCFUI_H
 
 #include "cart.h"
 #include "trackDb.h"
 #include "vcf.h"
 
 #define VCF_HAP_HEIGHT_VAR "hapClusterHeight"
 #define VCF_DEFAULT_HAP_HEIGHT 128
 
 #define VCF_HAP_ENABLED_VAR "hapClusterEnabled"
 
 #define VCF_HAP_COLORBY_VAR "hapClusterColorBy"
 #define VCF_HAP_COLORBY_REFALT "refAlt"
 #define VCF_HAP_COLORBY_BASE "base"
 
+#define VCF_APPLY_MIN_QUAL_VAR "applyMinQual"
+#define VCF_DEFAULT_APPLY_MIN_QUAL FALSE
+
+#define VCF_MIN_QUAL_VAR "minQual"
+#define VCF_DEFAULT_MIN_QUAL 0
+
+#define VCF_EXCLUDE_FILTER_VAR "excludeFilterValues"
+
 void vcfCfgHaplotypeCenter(struct cart *cart, struct trackDb *tdb, struct vcfFile *vcff,
 			   char *thisName, char *thisChrom, int thisPos, char *formName);
 /* If vcff has genotype data, show status and controls for choosing the center variant
  * for haplotype clustering/sorting in hgTracks. */
 
 void vcfCfgUi(struct cart *cart, struct trackDb *tdb, char *name, char *title, boolean boxed);
 /* Complete track controls for VCF. */
 
 #endif//def VCF_UI