Commits for steve

v257_base to v258_preview (2011-09-19 to 2011-09-27) v258

• Removed italics around organism name variable. This file used by several organisms and some do not use binomial nomenclature.
  • src/hg/makeDb/trackDb/blastHg16KG.html - lines changed 1, context: html, text, full: html, text
• Removed italics around organism name variable. This file used by several organisms and some do not use binomial nomenclature.
  • src/hg/makeDb/trackDb/blastHg16KG.html - lines changed 1, context: html, text, full: html, text
• Removed hyphen from 'well conserved'.
  • src/hg/makeDb/trackDb/sacCer/transRegCode.html - lines changed 1, context: html, text, full: html, text
• Added a note about adding track hubs directly to the browser URL to the 'Viewing Track Hubs' section. Changed the paragraph about hubCheck being available soon to reflect that hubCheck is now available.
  • src/hg/htdocs/goldenPath/help/hgTrackHubHelp.html - lines changed 17, context: html, text, full: html, text
• Made some formatting changes
  • src/hg/makeDb/trackDb/xenTro/xenTro3/gold.html - lines changed 6, context: html, text, full: html, text
• Italicized X. tropicalis
  • src/hg/makeDb/trackDb/xenTro/xenTro3/gap.html - lines changed 1, context: html, text, full: html, text
• Made minor grammatical changes. Inserted a link to the Tandem Repeats Finder as exists in the Simple Repeats track.
  • src/hg/makeDb/trackDb/microsat.html - lines changed 4, context: html, text, full: html, text
• Made a minor grammatical correction
  • src/hg/makeDb/trackDb/windowmaskerSdust.html - lines changed 1, context: html, text, full: html, text
• Made minor grammatical changes. Changed formatting of textbook reference. Journal link pointed to dx.doi.org, but was redirected to ScienceDirect. Changed the link to go straight to ScienceDirect.
  • src/hg/makeDb/trackDb/genscan.html - lines changed 5, context: html, text, full: html, text
• Removed capitalization from journal article title
  • src/hg/makeDb/trackDb/genscan.html - lines changed 1, context: html, text, full: html, text
• Made some minor grammatical corrections
  • src/hg/makeDb/trackDb/xenTro/xenTro2/gap.html - lines changed 3, context: html, text, full: html, text
• Made a verb tense correction
  • src/hg/makeDb/trackDb/xenTro/xenTro2/gap.html - lines changed 1, context: html, text, full: html, text
• Made some minor grammatical corrections and a verb tense correction
  • src/hg/makeDb/trackDb/xenTro/xenTro1/gap.html - lines changed 3, context: html, text, full: html, text
• Made some minor grammatical corrections
  • src/hg/makeDb/trackDb/gold.html - lines changed 4, context: html, text, full: html, text
• Made minor grammatical corrections
  • src/hg/makeDb/trackDb/turkey/melGal1/gold.html - lines changed 2, context: html, text, full: html, text
• Made some minor formatting corrections
  • src/hg/makeDb/trackDb/turkey/melGal1/gap.html - lines changed 3, context: html, text, full: html, text
• Made minor grammatical/formatting corrections
  • src/hg/makeDb/trackDb/nestedRepeats.html - lines changed 4, context: html, text, full: html, text
• Inserted the word 'the' to correct a sentence structure
  • src/hg/makeDb/trackDb/nestedRepeats.html - lines changed 1, context: html, text, full: html, text
• Removed a comma before 'which'
  • src/hg/makeDb/trackDb/simpleRepeat.html - lines changed 1, context: html, text, full: html, text
• Corrected citation of Repeat Masker web site according to the FAQ on their site
  • src/hg/makeDb/trackDb/rmsk.html - lines changed 2, context: html, text, full: html, text
• Corrected citation of Repeat Masker web site according to the FAQ on their site
  • src/hg/makeDb/trackDb/nestedRepeats.html - lines changed 2, context: html, text, full: html, text
• Added Robert Hubley to the Credits section as in the Interrupted Repeats track
  • src/hg/makeDb/trackDb/rmsk.html - lines changed 1, context: html, text, full: html, text
• Moved the dates for the Repeat Masker citation to the end of the line
  • src/hg/makeDb/trackDb/rmsk.html - lines changed 2, context: html, text, full: html, text
• Moved the dates for the Repeat Masker citation to the end of the line
  • src/hg/makeDb/trackDb/nestedRepeats.html - lines changed 2, context: html, text, full: html, text
• Made some minor formatting/grammatical changes. Italicized 'Bos taurus'.
  • src/hg/makeDb/trackDb/cow/bosTau6/gold.html - lines changed 5, context: html, text, full: html, text
• Made minor grammatical/formatting corrections
  • src/hg/makeDb/trackDb/cow/bosTau6/gap.html - lines changed 5, context: html, text, full: html, text
• Removed an unnecessary comma
  • src/hg/makeDb/trackDb/nestedRepeats.html - lines changed 1, context: html, text, full: html, text
• The journal article URL was being redirected to a new URL. Replaced the existing URL with the direct URL.
  • src/hg/makeDb/trackDb/simpleRepeat.html - lines changed 1, context: html, text, full: html, text
• Changed the format of the text for the NCBI link. Removed an unnecessary period.
  • src/hg/makeDb/trackDb/cow/bosTau6/ctgPos2.html - lines changed 2, context: html, text, full: html, text
• Made minor formatting/grammatical corrections
  • src/hg/makeDb/trackDb/cow/bosTau5/gold.html - lines changed 4, context: html, text, full: html, text
• Made minor formatting corrections
  • src/hg/makeDb/trackDb/cow/bosTau5/gap.html - lines changed 2, context: html, text, full: html, text
• Made minor formatting/grammatical corrections
  • src/hg/makeDb/trackDb/cow/bosTau4/gold.html - lines changed 4, context: html, text, full: html, text
• Made minor formatting corrections
  • src/hg/makeDb/trackDb/cow/bosTau4/gap.html - lines changed 2, context: html, text, full: html, text
• Make some minor grammatical/formatting corrections
  • src/hg/makeDb/trackDb/cow/bosTau3/gold.html - lines changed 4, context: html, text, full: html, text
• Made some minor formatting corrections
  • src/hg/makeDb/trackDb/cow/bosTau3/gap.html - lines changed 2, context: html, text, full: html, text
• Made some minor formatting changes
  • src/hg/makeDb/trackDb/gap.html - lines changed 2, context: html, text, full: html, text
• Made minor formatting changes
  • src/hg/makeDb/trackDb/cow/bosTau2/gold.html - lines changed 4, context: html, text, full: html, text