a8b66530fffa337e4bb8f178449ea9009219930a
mmaddren
  Fri Sep 30 12:44:51 2011 -0700
fixed the cv Validator
diff --git python/programs/cvValidate/cvValidate python/programs/cvValidate/cvValidate
index 3ed6509..09d13b2 100755
--- python/programs/cvValidate/cvValidate
+++ python/programs/cvValidate/cvValidate
@@ -1,31 +1,31 @@
 #!/hive/groups/encode/dcc/bin/python
 import sys
 import argparse
 from ucscgenomics import cv
 
 class validate(object):
 	"""validation script that calls cv.validate and then puts all its errors into a list"""
 
 	def __init__(self):
 	
 		parser = argparse.ArgumentParser(description = 'Validates the controlled vocabulary file')
-		parser.add_argument('-t', '--trackPath', help='Overrides the default track path ~/kent/src/hg/makeDb/trackDb/')
+		parser.add_argument('-c', '--cvPath', help='Overrides the default cv path ~/kent/src/hg/makeDb/trackDb/cv/alpha/cv.ra')
 		parser.add_argument('-p', '--protocolPath', help='Overrides the default protocol path ~/htdocsExtras/ENCODE/')
 		parser.add_argument('-n', '--nowarn', action='store_true', default=False, help='Suppress all warnings, only display breaking errors')
 		
 		args = parser.parse_args(sys.argv[1:])
 	
 		self.errors = list()
-		self.cv = cv.CvFile(args.trackPath, self.addtoerrs, args.protocolPath)	
+		self.cv = cv.CvFile(args.cvPath, self.addtoerrs, args.protocolPath)	
 		self.cv.validate()
 		
 		for err in self.errors:
 			print err
 			
 	def addtoerrs(self, exception):
 		self.errors.append(exception)
 
 if __name__ == '__main__':
     val = validate()