Commits for vsmalladi

v259_preview2 to v259_base (2011-11-01 to 2011-11-07) v259

• Added submission 5040 to track. Also upaded display of Cells in matrix and added useScore option for Peaks and Valley's.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwRepliSeq.ra - lines changed 451, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwRepliSeq.ra - lines changed 94, context: html, text, full: html, text
• Added submission 5026, which was left out of last weeks additions.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 130, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.new.ra - lines changed 18, context: html, text, full: html, text
• Updated View ordering as per lab. Redmine #4577.
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwRepliSeq.ra - lines changed 146, context: html, text, full: html, text
• Fixed typo in view name 'Vallyes' instead of 'Valleys'.
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwRepliSeq.ra - lines changed 1, context: html, text, full: html, text
• Removed objStatus from these experiments as they are okay, just 4 alignments are colloding. Removed notes in trackDb for 2 experiments, as it is easier to track in Redmine #4486.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 41, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhTfbs.new.ra - lines changed 4, context: html, text, full: html, text
• Massive rename to include Input in the file name and update meta-data for control's that had Control as None rather than Input. Also updated controlId to the correct set of values. Affects to track PSU Histone and TFBS.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodePsuHistone.ra - lines changed 536, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodePsuTfbs.ra - lines changed 740, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodePsuTfbs.ra - lines changed 10, context: html, text, full: html, text
• Add 8 submissions to track. Redmine #4145.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 1033, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.new.ra - lines changed 145, context: html, text, full: html, text
• Added md5sum's for the files.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodePsuHistone.ra - lines changed 131, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodePsuTfbs.ra - lines changed 162, context: html, text, full: html, text