File Changes for wong
switch to commits view, user indexv259_preview2 to v259_base (2011-11-01 to 2011-11-07) v259
- python/lib/ucscgenomics/mkChangeNotes.py
- lines changed 3, context: html, text, full: html, text
took out conditional that leaked in for a one time use change
- python/lib/ucscgenomics/track.py
- lines changed 8, context: html, text, full: html, text
made it so that it first checks with trackDb.wgEncode.ra to try and determine an alpha track.ra file
- src/hg/encode/encodeDownloadReadme/makefile
- src/hg/encode/encodeLoad/doEncodeLoad.pl
- lines changed 17, context: html, text, full: html, text
removed labs.ra and pi.ra from being needed by the pipeline
- lines changed 9, context: html, text, full: html, text
restored some lines for a clean change
- lines changed 9, context: html, text, full: html, text
Revert "restored some lines for a clean change"
This reverts commit 2992650196240f7e5d261da6e70e7ad2d4e2b402.
- lines changed 7, context: html, text, full: html, text
removed the need for labs.ra
- lines changed 13, context: html, text, full: html, text
changed how encodeValidate and friends uses packages to allow for same directory location of the packages
- src/hg/encode/encodeLoad/doEncodeUnload.pl
- lines changed 2, context: html, text, full: html, text
removed labs.ra and pi.ra from being needed by the pipeline
- lines changed 1, context: html, text, full: html, text
changed lib include line to not be beta
- lines changed 1, context: html, text, full: html, text
Revert "removed getGrants"
This reverts commit a512dbcc007cf4bc7c3a5cc6994938a593f688b8.
- lines changed 2, context: html, text, full: html, text
removed the need for labs.ra
- lines changed 13, context: html, text, full: html, text
changed how encodeValidate and friends uses packages to allow for same directory location of the packages
- src/hg/encode/encodeQaInit/encodeQaInit
- lines changed 14, context: html, text, full: html, text
added feature to print a slice of the mdb representative of the release directory files
- src/hg/encode/encodeValidate/doEncodeReport.pl
- lines changed 3, context: html, text, full: html, text
added a message about the removal of labs.ra
- src/hg/encode/encodeValidate/doEncodeValidate.pl
- lines changed 22, context: html, text, full: html, text
removed the need for labs.ra (grants)
- lines changed 22, context: html, text, full: html, text
removed labs.ra and pi.ra from being needed by the pipeline
- lines changed 22, context: html, text, full: html, text
Revert "removed the need for labs.ra (grants)"
This reverts commit 322bc1d109abaddbafa18c2d244bca374610a6e5.
- lines changed 4, context: html, text, full: html, text
removed the code for pi.ra
- lines changed 28, context: html, text, full: html, text
removed the need for labs.ra
- lines changed 14, context: html, text, full: html, text
changed how encodeValidate and friends uses packages to allow for same directory location of the packages
- src/hg/encode/qaUpdateMetadata/qaUpdateMetadata
- lines changed 4, context: html, text, full: html, text
added a switch to print the help
- src/hg/makeDb/doc/encodeDccHg18/wgEncodeHudsonalphaChipSeq.release3.notes
- lines changed 628, context: html, text, full: html, text
made with v2 mkchangenotes
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwHistone.release2.notes
- lines changed 3133, context: html, text, full: html, text
updated notes files for the Uw tracks
- lines changed 2079, context: html, text, full: html, text
new notes files for uw tfbs and histone
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwTfbs.release2.notes
- lines changed 2252, context: html, text, full: html, text
updated notes files for the Uw tracks
- lines changed 1451, context: html, text, full: html, text
new notes files for uw tfbs and histone
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra
- lines changed 136, context: html, text, full: html, text
added in missing controls, took out experiment for which we didn't have a control
- lines changed 17, context: html, text, full: html, text
added expId's and dcc's where available
- lines changed 81, context: html, text, full: html, text
added in expIds and dcc accessions
- lines changed 1991, context: html, text, full: html, text
converted internal controlId's to dccAccession
- lines changed 10, context: html, text, full: html, text
added md5sums for uw tfbs and histone
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwTfbs.ra
- lines changed 31, context: html, text, full: html, text
added in expIds and dcc accessions
- lines changed 687, context: html, text, full: html, text
converted internal controlId's to dccAccession
- lines changed 4, context: html, text, full: html, text
added md5sums for uw tfbs and histone
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.new.ra
- lines changed 48, context: html, text, full: html, text
added in missing controls, took out experiment for which we didn't have a control
- lines changed 555, context: html, text, full: html, text
changed long labels to be more consistent
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwTfbs.new.ra
- lines changed 266, context: html, text, full: html, text
removed experiments for which we don't have controls, pushing to next release
- lines changed 70, context: html, text, full: html, text
changed long labels to be more consistent
- src/hg/utils/automation/Encode.pm
- lines changed 20, context: html, text, full: html, text
removed the need for labs.ra to provide grant info
- lines changed 13, context: html, text, full: html, text
removed labs.ra from module, i think pi.ra was removed earlier
- lines changed 13, context: html, text, full: html, text
Revert "removed labs.ra from module, i think pi.ra was removed earlier"
This reverts commit 2d5bbffc954b7fb2e6cc4a31e497cf36cb7d9f23.
- lines changed 20, context: html, text, full: html, text
Revert "removed the need for labs.ra to provide grant info"
This reverts commit 644b3e99fdead58a36d512cef312fffab4d050de.
- lines changed 13, context: html, text, full: html, text
removed the code for pi.ra
- lines changed 21, context: html, text, full: html, text
removed the need for labs.ra
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