Commits for kate

v258_base to v259_preview (2011-10-10 to 2011-10-25) v259

• Add dataGroup field to dataType stanzas to categorize the types for presentation
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 33, context: html, text, full: html, text
• Just a note
  • src/hg/hgApi/hgApi.c - lines changed 1, context: html, text, full: html, text
• Merge branch 'master' into matrix
• Prettify a bit. Using -k option of jsbeautify allows this layout of array literals
  • src/hg/js/encodeChipMatrix.js - lines changed 9, context: html, text, full: html, text
• Trivial formatting
  • src/hg/htdocs/ENCODE/dataMatrix/chipMatrix.css - lines changed 4, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/dataMatrix.css - lines changed 41, context: html, text, full: html, text
  • src/hg/htdocs/style/encodeProject.css - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• Pull data summary page out of generic encode css file
  • src/hg/htdocs/ENCODE/dataMatrix/encodeDataSummaryInclude.html - lines changed 1, context: html, text, full: html, text
  • src/hg/htdocs/style/encodeProject.css - lines changed 61, context: html, text, full: html, text
• Figured out how to get beautifier to accept block comments
  • src/hg/js/encodeProject.js - lines changed 14, context: html, text, full: html, text
• Changes from code review: 1. Discover server 2. CLose html and body in single file 3. Replace hidden vars with js variables
  • src/hg/htdocs/ENCODE/dataMatrix/encodeChipMatrixHuman.html - lines changed 8, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeChipMatrixInclude.html - lines changed 4, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeChipMatrixMouse.html - lines changed 7, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeDataMatrixHuman.html - lines changed 8, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeDataMatrixInclude.html - lines changed 4, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeDataMatrixMouse.html - lines changed 7, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeDataSummaryHuman.html - lines changed 8, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeDataSummaryInclude.html - lines changed 2, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeDataSummaryMouse.html - lines changed 7, context: html, text, full: html, text
  • src/hg/htdocs/style/encodeProject.css - lines changed 1, context: html, text, full: html, text
  • src/hg/js/encodeChipMatrix.js - lines changed 19, context: html, text, full: html, text
  • src/hg/js/encodeDataMatrix.js - lines changed 37, context: html, text, full: html, text
  • src/hg/js/encodeDataSummary.js - lines changed 29, context: html, text, full: html, text
• From code review: direct all searches to named window instead of creating endless new ones with _blank. Also, bring up search with View=Any menu visible, to hint to user they are getting multiple views
  • src/hg/js/encodeChipMatrix.js - lines changed 1, context: html, text, full: html, text
  • src/hg/js/encodeDataMatrix.js - lines changed 2, context: html, text, full: html, text
• Separate out data summary style
  • src/hg/htdocs/ENCODE/dataMatrix/dataSummary.css - lines changed 50, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataMatrix/encodeDataSummaryInclude.html - lines changed 4, context: html, text, full: html, text
  • src/hg/js/encodeDataSummary.js - lines changed 1, context: html, text, full: html, text
• Merge branch 'master' into matrix
• Update data status spreadsheets as of Oct.20, 2011
  • src/hg/htdocs/ENCODE/dataSummary.html - lines changed 5, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/dataSummaryMouse.html - lines changed 5, context: html, text, full: html, text
• Minor formatting
  • src/hg/htdocs/ENCODE/dataSummaryMouse.html - lines changed 1, context: html, text, full: html, text
• Merge branch 'summary'