Commits for katrina

v258_base to v259_preview (2011-10-10 to 2011-10-25) v259

• adding one change to beta/cv.ra that Jeff made in response to my code review of beta/cv.ra and moving changes to public
  • src/hg/makeDb/trackDb/cv/beta/cv.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cv/public/cv.ra - lines changed 828, context: html, text, full: html, text
• minor wording edits to description of CSHL Long RNA-seq, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 6, context: html, text, full: html, text
• more minor wording edits to description of CSHL Long RNA-seq, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 1, context: html, text, full: html, text
• wording changes, tense correction, punctionation fixes for CSHL Long RNA-seq description, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 15, context: html, text, full: html, text
• minor rewording for better readability, redmine 43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 2, context: html, text, full: html, text
• releasing reviewed beta/cv.ra changes to the RR
  • src/hg/makeDb/trackDb/cv/public/cv.ra - lines changed 38, context: html, text, full: html, text
• removing double quotes from the hyperlinked text and placing them on the outside of it, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 1, context: html, text, full: html, text
• fixing typo of Gingeras lab, redmine 43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 1, context: html, text, full: html, text
• preparing metadata to release CSHL Long RNA-seq, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeCshlLongRnaSeq.ra - lines changed 35579, context: html, text, full: html, text
• adding CSHL Long RNA-seq, also changed long name of CSHL Sm RNA-seq from Laboratory to Lab to match longLabel and be consistent with CSHL Long, redmine #43
  • src/hg/htdocs/ENCODE/downloads.html - lines changed 6, context: html, text, full: html, text
• adding GIS RNA PET hg19, redmine #42
  • src/hg/htdocs/ENCODE/downloads.html - lines changed 5, context: html, text, full: html, text
• releasing metadata fix Venkat did to correct 56 tables originally incorrectly listed as objType file, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeCshlLongRnaSeq.ra - lines changed 57, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeCshlLongRnaSeq.ra - lines changed 57, context: html, text, full: html, text
• fixing links to supplemental directory to go to hgdownload instead of hgdownload test, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 2, context: html, text, full: html, text
• changed link to GIS RNA PET from genome-preview to the RR since GIS RNA PET was also released yesterday, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 1, context: html, text, full: html, text
• moved comma, redmine #43
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 1, context: html, text, full: html, text
• re-staging SYDH TFBS on beta and allowing Release2 to go back on alpha, redmine #69
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
• removing space between beta and public release tags for SYDH TFBS which was causing it not to see public, redmine #69
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• staging metadata changes on beta, remdine #69
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeSydhTfbs.ra - lines changed 357, context: html, text, full: html, text