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UCSC Genome Browser Project Staff:
-
Jim Kent: Research Scientist,
co-PI and architect of UCSC Genome Browser and
ENCODE DCC projects.
Design and implementation of the
Genome Browser and the
BLAT
sequence search tool. Author of the
the UCSC Genes annotations,
the Gene Sorter,
VisiGene,
Genome Graphs, chaining
and netting programs,
bigWig and bigBed formats, the
In Silico PCR tool, and the
GigAssembler.
-
Galt Barber:
Genome Browser and ENCODE DCC engineering.
-
Hiram Clawson:
Genome Browser engineering. Wiki support,
mirror and licensing technical support, modENCODE.
-
Melissa Cline:
ENCODE DCC and Genome Browser engineering.
-
Mark Diekhans:
Genome Browser technical engineering lead. Gencode,
CCDS, MGC projects. Genome Browser GenBank data
pipeline. PhD student.
-
Tim Dreszer:
ENCODE DCC and Genome Browser engineering.
-
Pauline Fujita:
Genome Browser QA, mailing list support.
-
Mary Goldman:
Genome Browser QA, mailing list support.
-
Luvina Guruvadoo:
Genome Browser QA, mailing list support.
-
Rachel Harte:
Gencode, CCDS, MGC curation.
-
+ Steve Heitner:
+ Genome Browser QA, mailing list support.
+
-
Angie Hinrichs:
Genome Browser engineering, SNPs and variation data,
modENCODE.
-
Fan Hsu:
Genome Browser engineering. Director of Proteomics. GSID.
-
Donna Karolchik:
Genome Browser program and engineering management,
documentation, web content, Genome Browser licensing.
-
Robert Kuhn:
Genome Browser associate director, QA manager,
training and outreach.
-
Katrina Learned:
ENCODE DCC QA lead, Genome Browser QA, mailing list
support.
-
Chin Li:
Genome Browser engineering.
-
Venkat Malladi:
ENCODE DCC biological data technician.
-
Larry Meyer:
Genome Browser and ENCODE DCC engineering.
-
Thomas Pringle:
Genome Browser technical advisor and power user.
-
Brian Raney:
Genome Browser and ENCODE DCC engineering.
-
Brooke Rhead:
Genome Browser QA lead, mailing list support.
-
Greg Roe:
Genome Browser QA, mailing list support.
-
Kate Rosenbloom:
ENCODE DCC technical project manager. Genome Browser
engineering.
-
Cricket Alicia Sloan:
ENCODE DCC biological data technician.
-
Vanessa Swing:
ENCODE DCC and Genome Browser QA, mailing list support.
-
+ Matt Wong:
+ ENCODE DCC biological data technician.
+
-
Ann Zweig:
Genome Browser technical project manager, mailing list manager.
Post-docs and Graduate Students (Browser-related support):
-
Steve Benz:
Graduate student - Cancer genomics browser.
-
- Rob Gravell:
- Graduate student - Assistance with ENCODE DCC
- data wrangling.
-
-
Jeff Long:
Graduate student - Assistance with ENCODE DCC
data wrangling.
-
- Craig Lowe:
- Graduate student - Contribution of transposons to the
- evolution of the human genome.
-
-
Morgan Maddren:
Undergraduate student - Assistance with ENCODE DCC
data wrangling.
-
Benedict Paten:
Graduate student - ENCODE DAC, comparative genomics and
evolutionary analysis.
-
Krishna Roskin:
PhD - ENCODE DCC GEO support, Phylogenetic analysis, Genome
Browser database support, early Table Browser support.
-
Zack Sanborn:
Graduate student - Cancer genomics browser.
-
Jing Zhu:
Cancer genomics browser project manager.
Systems Administration Staff:
Center for Biomolecular Science and Engineering
(CBSE) Staff:
We gratefully acknowledge the help of project alumni
Robert Baertsch, Gill Bejerano, Mathieu Blanchette,
Brenna Candelaria, Mike Chalup, Chad
Chen, Ron Chao, Vege Clerisse, Antonio Coelho, Jenny Draper,
- Phoenix Eagleshadow, Katy Elliott, Terry Furey, Patrick Gavin,
- Jennifer Jackson, Scot Kennedy, Andy Kern, Nick Littlestone,
- Yontao Lu, Crystal Lynch, Jian Ma, Chester Manuel, Jakob
+ Phoenix Eagleshadow, Katy Elliott, Terry Furey, Patrick Gavin, Rob Gravell,
+ Jennifer Jackson, Scot Kennedy, Andy Kern, Victoria Lin, Nick Littlestone,
+ Craig Lowe, Yontao Lu, Crystal Lynch, Jian Ma, Chester Manuel, Jakob
Pedersen,
Mike Pheasant, Andy Pohl, Katie Pollard, Ruth Rabinowitz,
Sanja Rogic, Matt Schwartz, Adam Siepel, Kayla Smith,
Chuck Sugnet,
Bernard Suh, Ali Sultan-Qurraie, Paul Tatarksy,
Archana Thakkapallayil, Daryl Thomas, Aaron Tomb,
Heather Trumbower, Sandra Walton, Ting Wang,
Ryan Weber, Alexander Wolfe, Wei Wu, Matt Xia, Chen-Hsiang
Yeang, and Degui Zhi.
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