8db924e441634433d0c48f119ebd84a9e636e6e6
chinhli
Thu Oct 27 15:10:42 2011 -0700
Rename track lincRNAsIsoforms to lincRNAsTranscripts
diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c
index d1f8e52..ef4f2f1 100644
--- src/hg/hgc/hgc.c
+++ src/hg/hgc/hgc.c
@@ -2578,31 +2578,31 @@
{
puts("
\n");
hgcAnchorSomewhere(pepClick, pepName, pepTable, seqName);
printf("Predicted Protein \n");
puts("\n");
foundPep = TRUE;
}
if (!foundPep)
{
char *autoTranslate = trackDbSetting(tdb, "autoTranslate");
if (autoTranslate == NULL || differentString(autoTranslate, "0"))
{
puts("\n");
/* put out correct message to describe translated mRNA */
if ((sameString(geneTable, "ensGene")) || (sameString(geneTable, "vegaGene")) || (sameString(geneTable, "vegaPseudoGene"))
- || (sameString(geneTable, "lincRNAsIsoforms")) )
+ || (sameString(geneTable, "lincRNAsTranscripts")) )
{
printf("Non-protein coding gene or gene fragment, no protein prediction available.");
}
else if (!genbankIsRefSeqNonCodingMRnaAcc(geneName))
{
hgcAnchorSomewhere("htcTranslatedPredMRna", geneName,
"translate", seqName);
printf("Translated Protein from ");
if (sameString(geneTable, "refGene") )
{
printf("genomic DNA\n");
}
else
{
printf("predicted mRNA \n");