a44421a79fb36cc2036fe116b97ea3bc9590cd0c braney Fri Dec 2 09:34:39 2011 -0800 removed rcsid (#295) diff --git src/jkOwnLib/bandExt.c src/jkOwnLib/bandExt.c index 578de0c..b9fd893 100644 --- src/jkOwnLib/bandExt.c +++ src/jkOwnLib/bandExt.c @@ -6,31 +6,30 @@ * gaps and mismatches. * * This version of the algorithm uses affine gap scorea and * has the neat feature that the band can wander around. * When a score exceeds any previous score, the band will be * recentered around the highest scoring position. */ /* Copyright 2003-5 Jim Kent. All rights reserved. */ #include "common.h" #include "dnaseq.h" #include "axt.h" #include "fuzzyFind.h" #include "localmem.h" #include "bandExt.h" -static char const rcsid[] = "$Id: bandExt.c,v 1.13 2006/03/14 19:02:31 angie Exp $"; /* Definitions for traceback byte. This is encoded as so: * xxxxLUMM * where the x's are not used. The L bit is set if parent of the left insert * is also a left insert (otherwise it is a match). Likewise the U bit is set * if the parent of an up insert is also an up insert. The MM bits contain the * parent of the match state. */ #define mpMatch 1 #define mpUp 2 #define mpLeft 3 #define mpMask 3 #define upExt (1<<2) #define lpExt (1<<3)