a44421a79fb36cc2036fe116b97ea3bc9590cd0c
braney
  Fri Dec 2 09:34:39 2011 -0800
removed rcsid (#295)
diff --git src/hg/lib/cddInfo.c src/hg/lib/cddInfo.c
index 9cfb701..fe8fa4d 100644
--- src/hg/lib/cddInfo.c
+++ src/hg/lib/cddInfo.c
@@ -1,177 +1,176 @@
 /* cddInfo.c was originally generated by the autoSql program, which also 
  * generated cddInfo.h and cddInfo.sql.  This module links the database and
  * the RAM representation of objects. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "cddInfo.h"
 
-static char const rcsid[] = "$Id: cddInfo.c,v 1.1 2009/09/02 23:55:09 holmes Exp $";
 
 void cddInfoStaticLoad(char **row, struct cddInfo *ret)
 /* Load a row from cddInfo table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->chrom = row[0];
 ret->chromStart = sqlUnsigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = row[3];
 ret->score = sqlUnsigned(row[4]);
 safecpy(ret->strand, sizeof(ret->strand), row[5]);
 ret->fullname = row[6];
 ret->NCBInum = row[7];
 ret->evalue = sqlDouble(row[8]);
 ret->percentlength = sqlUnsigned(row[9]);
 ret->percentident = sqlUnsigned(row[10]);
 }
 
 struct cddInfo *cddInfoLoad(char **row)
 /* Load a cddInfo from row fetched with select * from cddInfo
  * from database.  Dispose of this with cddInfoFree(). */
 {
 struct cddInfo *ret;
 
 AllocVar(ret);
 ret->chrom = cloneString(row[0]);
 ret->chromStart = sqlUnsigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = cloneString(row[3]);
 ret->score = sqlUnsigned(row[4]);
 safecpy(ret->strand, sizeof(ret->strand), row[5]);
 ret->fullname = cloneString(row[6]);
 ret->NCBInum = cloneString(row[7]);
 ret->evalue = sqlDouble(row[8]);
 ret->percentlength = sqlUnsigned(row[9]);
 ret->percentident = sqlUnsigned(row[10]);
 return ret;
 }
 
 struct cddInfo *cddInfoLoadAll(char *fileName) 
 /* Load all cddInfo from a whitespace-separated file.
  * Dispose of this with cddInfoFreeList(). */
 {
 struct cddInfo *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[11];
 
 while (lineFileRow(lf, row))
     {
     el = cddInfoLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct cddInfo *cddInfoLoadAllByChar(char *fileName, char chopper) 
 /* Load all cddInfo from a chopper separated file.
  * Dispose of this with cddInfoFreeList(). */
 {
 struct cddInfo *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[11];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = cddInfoLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct cddInfo *cddInfoCommaIn(char **pS, struct cddInfo *ret)
 /* Create a cddInfo out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new cddInfo */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->chrom = sqlStringComma(&s);
 ret->chromStart = sqlUnsignedComma(&s);
 ret->chromEnd = sqlUnsignedComma(&s);
 ret->name = sqlStringComma(&s);
 ret->score = sqlUnsignedComma(&s);
 sqlFixedStringComma(&s, ret->strand, sizeof(ret->strand));
 ret->fullname = sqlStringComma(&s);
 ret->NCBInum = sqlStringComma(&s);
 ret->evalue = sqlDoubleComma(&s);
 ret->percentlength = sqlUnsignedComma(&s);
 ret->percentident = sqlUnsignedComma(&s);
 *pS = s;
 return ret;
 }
 
 void cddInfoFree(struct cddInfo **pEl)
 /* Free a single dynamically allocated cddInfo such as created
  * with cddInfoLoad(). */
 {
 struct cddInfo *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->chrom);
 freeMem(el->name);
 freeMem(el->fullname);
 freeMem(el->NCBInum);
 freez(pEl);
 }
 
 void cddInfoFreeList(struct cddInfo **pList)
 /* Free a list of dynamically allocated cddInfo's */
 {
 struct cddInfo *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     cddInfoFree(&el);
     }
 *pList = NULL;
 }
 
 void cddInfoOutput(struct cddInfo *el, FILE *f, char sep, char lastSep) 
 /* Print out cddInfo.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->chrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->chromStart);
 fputc(sep,f);
 fprintf(f, "%u", el->chromEnd);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->score);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->strand);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->fullname);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->NCBInum);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%g", el->evalue);
 fputc(sep,f);
 fprintf(f, "%u", el->percentlength);
 fputc(sep,f);
 fprintf(f, "%u", el->percentident);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */