a44421a79fb36cc2036fe116b97ea3bc9590cd0c braney Fri Dec 2 09:34:39 2011 -0800 removed rcsid (#295) diff --git src/hg/lib/cnpIafrate.c src/hg/lib/cnpIafrate.c index 8f0cab9..d2c2016 100644 --- src/hg/lib/cnpIafrate.c +++ src/hg/lib/cnpIafrate.c @@ -1,147 +1,146 @@ /* cnpIafrate.c was originally generated by the autoSql program, which also * generated cnpIafrate.h and cnpIafrate.sql. This module links the database and * the RAM representation of objects. */ #include "common.h" #include "linefile.h" #include "dystring.h" #include "jksql.h" #include "cnpIafrate.h" -static char const rcsid[] = "$Id: cnpIafrate.c,v 1.1 2005/06/17 20:12:48 heather Exp $"; void cnpIafrateStaticLoad(char **row, struct cnpIafrate *ret) /* Load a row from cnpIafrate table into ret. The contents of ret will * be replaced at the next call to this function. */ { ret->chrom = row[0]; ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = row[3]; ret->variationType = row[4]; ret->score = atof(row[5]); } struct cnpIafrate *cnpIafrateLoad(char **row) /* Load a cnpIafrate from row fetched with select * from cnpIafrate * from database. Dispose of this with cnpIafrateFree(). */ { struct cnpIafrate *ret; AllocVar(ret); ret->chrom = cloneString(row[0]); ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = cloneString(row[3]); ret->variationType = cloneString(row[4]); ret->score = atof(row[5]); return ret; } struct cnpIafrate *cnpIafrateLoadAll(char *fileName) /* Load all cnpIafrate from a whitespace-separated file. * Dispose of this with cnpIafrateFreeList(). */ { struct cnpIafrate *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[6]; while (lineFileRow(lf, row)) { el = cnpIafrateLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct cnpIafrate *cnpIafrateLoadAllByChar(char *fileName, char chopper) /* Load all cnpIafrate from a chopper separated file. * Dispose of this with cnpIafrateFreeList(). */ { struct cnpIafrate *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[6]; while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) { el = cnpIafrateLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct cnpIafrate *cnpIafrateCommaIn(char **pS, struct cnpIafrate *ret) /* Create a cnpIafrate out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new cnpIafrate */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->chrom = sqlStringComma(&s); ret->chromStart = sqlUnsignedComma(&s); ret->chromEnd = sqlUnsignedComma(&s); ret->name = sqlStringComma(&s); ret->variationType = sqlStringComma(&s); ret->score = sqlFloatComma(&s); *pS = s; return ret; } void cnpIafrateFree(struct cnpIafrate **pEl) /* Free a single dynamically allocated cnpIafrate such as created * with cnpIafrateLoad(). */ { struct cnpIafrate *el; if ((el = *pEl) == NULL) return; freeMem(el->chrom); freeMem(el->name); freeMem(el->variationType); freez(pEl); } void cnpIafrateFreeList(struct cnpIafrate **pList) /* Free a list of dynamically allocated cnpIafrate's */ { struct cnpIafrate *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; cnpIafrateFree(&el); } *pList = NULL; } void cnpIafrateOutput(struct cnpIafrate *el, FILE *f, char sep, char lastSep) /* Print out cnpIafrate. Separate fields with sep. Follow last field with lastSep. */ { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->chrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->chromStart); fputc(sep,f); fprintf(f, "%u", el->chromEnd); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->variationType); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%g", el->score); fputc(lastSep,f); } /* -------------------------------- End autoSql Generated Code -------------------------------- */